RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 EXD2Q9NVH0 621 aa11□□□□□ -0.65
SKA3-206ENST00000475251 OXSMQ9NWU1 459 aa11□□□□□ -0.65
SKA3-206ENST00000475251 TMEM181Q9P2C4 612 aa11□□□□□ -0.65
SKA3-206ENST00000475251 MID2Q9UJV3 735 aa11□□□□□ -0.65
SKA3-206ENST00000475251 EMCNQ9ULC0 261 aa11□□□□□ -0.65
SKA3-206ENST00000475251 PCDHGB4Q9UN71 923 aa11□□□□□ -0.65
SKA3-206ENST00000475251 TRAPPC4Q9Y296 219 aa11□□□□□ -0.65
SKA3-206ENST00000475251 FIS1Q9Y3D6 152 aa11□□□□□ -0.65
SKA3-206ENST00000475251 KCNE3Q9Y6H6 103 aa11□□□□□ -0.65
SKA3-206ENST00000475251 SVEP1Q4LDE5 3571 aa11□□□□□ -0.65
SKA3-206ENST00000475251 UGT2B17O75795 530 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 C6orf47O95873 294 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 AGR2O95994 175 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 PROCP04070 461 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 LINC00032P0C843 101 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 LAMP1P11279 417 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 CPA3P15088 417 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 GIFP27352 417 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 ECHS1P30084 290 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 HTR3AP46098 478 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 IDH3GP51553 393 aaPredicted RBP10.99□□□□□ -0.65
SKA3-206ENST00000475251 MAP2K6P52564 334 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 FOXG1P55316 489 aaPredicted RBP10.99□□□□□ -0.65
SKA3-206ENST00000475251 OR2B6P58173 313 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 SLC35A1P78382 337 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 EFNB3Q15768 340 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 C9orf135Q5VTT2 229 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 KANK2Q63ZY3 851 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 C16orf62Q7Z3J2 963 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 SPATA19Q7Z5L4 167 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 CCDC103Q8IW40 242 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 DDIASQ8IXT1 998 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 ANKS4BQ8N8V4 417 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 POMGNT2Q8NAT1 580 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 OR5D16Q8NGK9 328 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 SGMS2Q8NHU3 365 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 NEU4Q8WWR8 484 aaPredicted RBP10.99□□□□□ -0.65
SKA3-206ENST00000475251 DDIT4LQ96D03 193 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 BOD1Q96IK1 185 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 ARL5BQ96KC2 179 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 PPP3R2Q96LZ3 170 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 CTPS2Q9NRF8 586 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 SLC7A10Q9NS82 523 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 FLVCR1Q9Y5Y0 555 aa10.99□□□□□ -0.65
SKA3-206ENST00000475251 RIPK2O43353 540 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 PLIN3O60664 434 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 STAMBPO95630 424 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 TACSTD2P09758 323 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 MATN1P21941 496 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 APEX1P27695 318 aaKnown RBP10.98□□□□□ -0.65
SKA3-206ENST00000475251 NTF4P34130 210 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 SOAT1P35610 550 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 SLC1A3P43003 542 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 H3F3AP84243 136 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 SLC25A3Q00325 362 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 WHAMMP3Q1A5X7 153 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 ARHGAP11BQ3KRB8 267 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 FAM153CQ494X1 144 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 ATAD3BQ5T9A4 648 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 TSPO2Q5TGU0 170 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.98□□□□□ -0.65
SKA3-206ENST00000475251 FAM71CQ8NEG0 241 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 PMM1Q92871 262 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 TMEM45BQ96B21 275 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 C1orf159Q96HA4 380 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 ZNF317Q96PQ6 595 aaPredicted RBP10.98□□□□□ -0.65
SKA3-206ENST00000475251 SLC38A2Q96QD8 506 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 ZNF350Q9GZX5 532 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 SAP130Q9H0E3 1048 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 PLK3Q9H4B4 646 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 TUBB1Q9H4B7 451 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 POLE3Q9NRF9 147 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 TBK1Q9UHD2 729 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 MKLN1Q9UL63 735 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 DNAJC15Q9Y5T4 150 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 ARFGEF3Q5TH69 2177 aa10.98□□□□□ -0.65
SKA3-206ENST00000475251 LRP5LA4QPB2 252 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 ZNF208O43345 1280 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 FCMRO60667 390 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 KRT33AO76009 404 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 GUSBP08236 651 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 OR4A8P0C604 315 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 DAOP14920 347 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 PRPS1L1P21108 318 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 RYKP34925 604 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 CRHR1P34998 444 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 PGM1P36871 562 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 DVL1P1P54792 670 aaPredicted RBP10.97□□□□□ -0.65
SKA3-206ENST00000475251 UBE2NP61088 152 aaKnown RBP10.97□□□□□ -0.65
SKA3-206ENST00000475251 ACTG1P63261 375 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 ZSWIM7Q19AV6 140 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 C3orf36Q3SXR2 165 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 OR4F15Q8NGB8 312 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 OR5AK3PQ8NH89 298 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 TWIST2Q8WVJ9 160 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 COQ8BQ96D53 544 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 SOX7Q9BT81 388 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 SF3B5Q9BWJ5 86 aaKnown RBP10.97□□□□□ -0.65
SKA3-206ENST00000475251 PIF1Q9H611 641 aa10.97□□□□□ -0.65
SKA3-206ENST00000475251 EXOSC3Q9NQT5 275 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms