RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ATP6V1C1P21283 382 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 CCR4P51679 360 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 CHN2P52757 468 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 SLC16A1P53985 500 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 PHC1P78364 1004 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 LGALS3BPQ08380 585 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 MERTKQ12866 999 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 TP53BP2Q13625 1128 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 CBFBQ13951 182 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 PTGR1Q14914 329 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 FAM153CQ494X1 144 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 GALNTL6Q49A17 601 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 HIKESHIQ53FT3 197 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 AP1ARQ63HQ0 302 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 C3orf33Q6P1S2 294 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 UGT2A3Q6UWM9 527 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 HMGN2P46Q86SG4 172 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 ZCCHC24Q8N2G6 241 aaKnown RBP8.11□□□□□ -1.11
VCL-204ENST00000472585 FAM71CQ8NEG0 241 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 TOR1AIP2Q8NFQ8 470 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 OR5AK3PQ8NH89 298 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 ACMSDQ8TDX5 336 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 ADAMTS15Q8TE58 950 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 FAM216AQ8WUB2 273 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 COQ8BQ96D53 544 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 MTERF3Q96E29 417 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 C3orf30Q96M34 536 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 VRK1Q99986 396 aaPredicted RBP8.11□□□□□ -1.11
VCL-204ENST00000472585 RBM4Q9BWF3 364 aaKnown RBP8.11□□□□□ -1.11
VCL-204ENST00000472585 GATA5Q9BWX5 397 aaPredicted RBP8.11□□□□□ -1.11
VCL-204ENST00000472585 SEC61A2Q9H9S3 476 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 FKRPQ9H9S5 495 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 TBK1Q9UHD2 729 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 MKLN1Q9UL63 735 aa8.11□□□□□ -1.11
VCL-204ENST00000472585 IGHV1-18A0A0C4DH31 117 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 CLDN24A6NM45 220 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 H3BNH8 94 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 AZIN1O14977 448 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 TMPRSS2O15393 492 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 MRPL33O75394 65 aaKnown RBP8.1□□□□□ -1.11
VCL-204ENST00000472585 CRCPO75575 148 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 CYP7B1O75881 506 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 RGS9O75916 674 aaPredicted RBP8.1□□□□□ -1.11
VCL-204ENST00000472585 SNUPNO95149 360 aaKnown RBP8.1□□□□□ -1.11
VCL-204ENST00000472585 STAMBPO95630 424 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 CHRNGP07510 517 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 UBTFL6P0CB48 400 aaPredicted RBP8.1□□□□□ -1.11
VCL-204ENST00000472585 DDX5P17844 614 aaKnown RBP8.1□□□□□ -1.11
VCL-204ENST00000472585 APEX1P27695 318 aaKnown RBP8.1□□□□□ -1.11
VCL-204ENST00000472585 ARRB2P32121 409 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 PGM1P36871 562 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 HBA1P69905 142 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 FUT5Q11128 374 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 GPR68Q15743 365 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 ADIPOQQ15848 244 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 ATP6AP1LQ52LC2 224 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 KANK2Q63ZY3 851 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 OR7E24Q6IFN5 339 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 SHQ1Q6PI26 577 aaKnown RBP8.1□□□□□ -1.11
VCL-204ENST00000472585 RNF165Q6ZSG1 346 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 PEG10Q86TG7 708 aaKnown RBP8.1□□□□□ -1.11
VCL-204ENST00000472585 RIMKLAQ8IXN7 391 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 TMCO5AQ8N6Q1 288 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 OR5P2Q8WZ92 322 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 ST8SIA1Q92185 356 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 ZNF385AQ96PM9 386 aaKnown RBP8.1□□□□□ -1.11
VCL-204ENST00000472585 JMJD8Q96S16 334 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 TXLNGYQ9BZA5 131 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 NMUR2Q9GZQ4 415 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 DCDC2Q9UHG0 476 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 PCDHB10Q9UN67 800 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 ZNF281Q9Y2X9 895 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 FLVCR1Q9Y5Y0 555 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 VWFP04275 2813 aa8.1□□□□□ -1.11
VCL-204ENST00000472585 TMEM129A0AVI4 362 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 ZC3H12DA2A288 527 aaKnown RBP8.09□□□□□ -1.11
VCL-204ENST00000472585 LYNX1G3V0Z9 82 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 NR5A2O00482 541 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 PIP5K1BO14986 540 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 PEX11AO75192 247 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 PMS2P2O95744 297 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 CSTAP01040 98 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 FGF4P08620 206 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 LYNX1P0DP58 116 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 TFPIP10646 304 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 CPA3P15088 417 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 CCNA2P20248 432 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 CALCRP30988 508 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 RYKP34925 604 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 CRHR1P34998 444 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 SERPINF1P36955 418 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 APOBEC1P41238 236 aaKnown RBP8.09□□□□□ -1.11
VCL-204ENST00000472585 LIMS1P48059 325 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 SNRPD2P62316 118 aaKnown RBP8.09□□□□□ -1.11
VCL-204ENST00000472585 CSNK2A1P68400 391 aaPredicted RBP8.09□□□□□ -1.11
VCL-204ENST00000472585 HGFACQ04756 655 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 SLC17A1Q14916 467 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 TRIP10Q15642 601 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 AWAT1Q58HT5 328 aa8.09□□□□□ -1.11
VCL-204ENST00000472585 TYW3Q6IPR3 259 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms