RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 TRBV5-3A0A0A0MS03 114 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 A0A0G2JPF8 293 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 HNRNPCL2B2RXH8 293 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 HNRNPCL3B7ZW38 293 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 DYNC1I1O14576 645 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 HNRNPCL1O60812 293 aaKnown RBP19.28■□□□□ 0.68
LIME1-203ENST00000465591 HNRNPCL4P0DMR1 293 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 CLK1P49759 484 aaKnown RBP19.28■□□□□ 0.68
LIME1-203ENST00000465591 OR2B6P58173 313 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 TAB1Q15750 504 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 ACKR1Q16570 336 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 AGKQ53H12 422 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 RNF220Q5VTB9 566 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 SEZ6L2Q6UXD5 910 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 Q6ZT83 130 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 ATG4DQ86TL0 474 aaPredicted RBP19.28■□□□□ 0.68
LIME1-203ENST00000465591 WFDC11Q8NEX6 87 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 STEAP2Q8NFT2 490 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 PLPPR2Q96GM1 343 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 TMEM181Q9P2C4 612 aa19.28■□□□□ 0.68
LIME1-203ENST00000465591 ZNF208O43345 1280 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 FRS3O43559 492 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 LYZL6O75951 148 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 THBS1P07996 1170 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 CD99P14209 185 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 IL32P24001 234 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 ATP4BP51164 291 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 H3F3AP84243 136 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 FADDQ13158 208 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 ITGADQ13349 1161 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 PDK3Q15120 406 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 GALNT5Q7Z7M9 940 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 SERPINA11Q86U17 422 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 ZNF440Q8IYI8 595 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 KISS1RQ969F8 398 aaPredicted RBP19.27■□□□□ 0.68
LIME1-203ENST00000465591 SPATA9Q9BWV2 254 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 HDHD5Q9BXW7 423 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 BCL2L10Q9HD36 194 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 MED4Q9NPJ6 270 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 BEX4Q9NWD9 120 aaPredicted RBP19.27■□□□□ 0.68
LIME1-203ENST00000465591 THUMPD1Q9NXG2 353 aaKnown RBP19.27■□□□□ 0.68
LIME1-203ENST00000465591 TRAPPC4Q9Y296 219 aa19.27■□□□□ 0.68
LIME1-203ENST00000465591 DNPH1O43598 174 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 IGHV3-9P01782 118 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 IGHV1-2P23083 117 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 FKBP2P26885 142 aaKnown RBP19.26■□□□□ 0.67
LIME1-203ENST00000465591 HOXC12P31275 282 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 SLC16A1P53985 500 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 BNIP2Q12982 314 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 SQLEQ14534 574 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 LARS2Q15031 903 aaKnown RBP19.26■□□□□ 0.67
LIME1-203ENST00000465591 P2RY6Q15077 328 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 ZNF704Q6ZNC4 412 aaPredicted RBP19.26■□□□□ 0.67
LIME1-203ENST00000465591 BHLHA15Q7RTS1 189 aaPredicted RBP19.26■□□□□ 0.67
LIME1-203ENST00000465591 COMTD1Q86VU5 262 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 CADM2Q8N3J6 435 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 DDIT4LQ96D03 193 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 ZHX1-C8orf76Q96EF9 292 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 TMEM204Q9BSN7 226 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 RAD21L1Q9H4I0 556 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 ZNF385DQ9H6B1 395 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 DCTN4Q9UJW0 460 aa19.26■□□□□ 0.67
LIME1-203ENST00000465591 EDF1O60869 148 aaKnown RBP19.25■□□□□ 0.67
LIME1-203ENST00000465591 PGM3O95394 542 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 ARAFP10398 606 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 UQCRBP14927 111 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 FPR1P21462 350 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 HOXC5Q00444 222 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 ZNF311Q5JNZ3 666 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 PRAMEF8Q5VWM4 474 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 PRAMEF7Q5VXH5 474 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 ZNF100Q8IYN0 542 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 NFKBIDQ8NI38 313 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 PIGXQ8TBF5 258 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 DLL4Q9NR61 685 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 EMC3Q9P0I2 261 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 GMEB1Q9Y692 573 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 ZFHX3Q15911 3703 aa19.25■□□□□ 0.67
LIME1-203ENST00000465591 TMEM247A6NEH6 219 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 COX5AP20674 150 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 ADSLP30566 484 aaPredicted RBP19.24■□□□□ 0.67
LIME1-203ENST00000465591 SLC35A1P78382 337 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 GCNT6Q5T4J0 391 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 WBP2NLQ6ICG8 309 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 DLEU7Q6UYE1 221 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 BBS10Q8TAM1 723 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 IGFBPL1Q8WX77 278 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 STON2Q8WXE9 905 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 C3orf49Q96BT1 292 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 NPHS2Q9NP85 383 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 TMEM45AQ9NWC5 275 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 ZNF232Q9UNY5 417 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 NOSIPQ9Y314 301 aaKnown RBP19.24■□□□□ 0.67
LIME1-203ENST00000465591 IFT52Q9Y366 437 aa19.24■□□□□ 0.67
LIME1-203ENST00000465591 A0A1W2PP18 115 aa19.23■□□□□ 0.67
LIME1-203ENST00000465591 LIPT2A6NK58 231 aa19.23■□□□□ 0.67
LIME1-203ENST00000465591 NCF2P19878 526 aaPredicted RBP19.23■□□□□ 0.67
LIME1-203ENST00000465591 CXCR1P25024 350 aa19.23■□□□□ 0.67
LIME1-203ENST00000465591 NR1H2P55055 460 aa19.23■□□□□ 0.67
LIME1-203ENST00000465591 FOXG1P55316 489 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms