RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ZHX1-C8orf76Q96EF9 292 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 ARL5BQ96KC2 179 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF300Q96RE9 604 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-207ENST00000461798 BDH2Q9BUT1 245 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 CXorf56Q9H5V9 222 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 ESRP2Q9H6T0 727 aaKnown RBP8.1□□□□□ -1.11
BRCA1-207ENST00000461798 SLC6A13Q9NSD5 602 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 NKIRAS1Q9NYS0 192 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 EMC3Q9P0I2 261 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 TMEM181Q9P2C4 612 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 PRSS50Q9UI38 385 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 OSGIN1Q9UJX0 560 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 RNF115Q9Y4L5 304 aa8.1□□□□□ -1.11
BRCA1-207ENST00000461798 DSPPQ9NZW4 1301 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 TMED7-TICAM2A0A0A6YYA0 188 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 DPRXA6NFQ7 191 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 CFAP73A6NFT4 308 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 C9JVG2 144 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 AP3D1O14617 1153 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 UBDO15205 165 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 EIF1BO60739 113 aaKnown RBP8.09□□□□□ -1.11
BRCA1-207ENST00000461798 ERLIN1O75477 346 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 CD3EP07766 207 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 DANCRP0C864 163 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 NR2F1P10589 423 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 KITP10721 976 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 IL7RP16871 459 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 IGHV1-2P23083 117 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 ADSLP30566 484 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-207ENST00000461798 NTF4P34130 210 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 POLR2HP52434 150 aaKnown RBP8.09□□□□□ -1.11
BRCA1-207ENST00000461798 SLC35A1P78382 337 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 LTBQ06643 244 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 EPS8Q12929 822 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 SLC9B1Q4ZJI4 515 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 C1QTNF12Q5T7M4 302 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 FBXW9Q5XUX1 488 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 NXNQ6DKJ4 435 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 EPGNQ6UW88 154 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 PEX5LQ8IYB4 626 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF100Q8IYN0 542 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 ZNF433Q8N7K0 673 aaPredicted RBP8.09□□□□□ -1.11
BRCA1-207ENST00000461798 PIGXQ8TBF5 258 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 MGARPQ8TDB4 240 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 WDR60Q8WVS4 1066 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 AKAP1Q92667 903 aaKnown RBP eCLIP8.09□□□□□ -1.11
BRCA1-207ENST00000461798 PERPQ96FX8 193 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 Q96MF0 132 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 MUS81Q96NY9 551 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 OR52B2Q96RD2 323 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 SMR3AQ99954 134 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 GRIP2Q9C0E4 1043 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 OR11A1Q9GZK7 315 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 PIF1Q9H611 641 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 RMND5AQ9H871 391 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 TPT1P8Q9HAU6 139 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 THUMPD1Q9NXG2 353 aaKnown RBP8.09□□□□□ -1.11
BRCA1-207ENST00000461798 CALML5Q9NZT1 146 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 TMED7Q9Y3B3 224 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 FREM1Q5H8C1 2179 aa8.09□□□□□ -1.11
BRCA1-207ENST00000461798 DSCAMO60469 2012 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 ABCA2Q9BZC7 2435 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 A0A0G2JPF8 293 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 TMEM72A0PK05 275 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 CDHR4A6H8M9 788 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 OR5H1A6NKK0 313 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 HNRNPCL2B2RXH8 293 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 HNRNPCL3B7ZW38 293 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 HNRNPCL1O60812 293 aaKnown RBP8.08□□□□□ -1.12
BRCA1-207ENST00000461798 RAMP1O60894 148 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 LYZL6O75951 148 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 TGDSO95455 350 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 LY6G6DO95868 133 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 HEXAP06865 529 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 THBS1P07996 1170 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 HNRNPCL4P0DMR1 293 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 IMPDH2P12268 514 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 BMP2P12643 396 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 UQCRBP14927 111 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 GGT1P19440 569 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 TACR3P29371 465 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 ACAA2P42765 397 aaKnown RBP8.08□□□□□ -1.12
BRCA1-207ENST00000461798 POLR2JP52435 117 aaKnown RBP8.08□□□□□ -1.12
BRCA1-207ENST00000461798 OR2B6P58173 313 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 BSPH1Q075Z2 132 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 PPA1Q15181 289 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 ZNF672Q499Z4 452 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-207ENST00000461798 MRPL2Q5T653 305 aaKnown RBP8.08□□□□□ -1.12
BRCA1-207ENST00000461798 AGBL2Q5U5Z8 902 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 RNF220Q5VTB9 566 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 PRAMEF8Q5VWM4 474 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 PRAMEF7Q5VXH5 474 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 CLEC9AQ6UXN8 241 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 HMGN2P46Q86SG4 172 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 CCDC103Q8IW40 242 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 MIER2Q8N344 545 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 CIARTQ8N365 385 aaPredicted RBP8.08□□□□□ -1.12
BRCA1-207ENST00000461798 OR52P1PQ8NH57 321 aa8.08□□□□□ -1.12
BRCA1-207ENST00000461798 PNPT1Q8TCS8 783 aaKnown RBP8.08□□□□□ -1.12
BRCA1-207ENST00000461798 SLC38A5Q8WUX1 472 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms