RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 TMED7Q9Y3B3 224 aa5.44□□□□□ -1.54
SDC4P-201ENST00000453285 PCDHGB6Q9Y5F9 930 aa5.44□□□□□ -1.54
SDC4P-201ENST00000453285 CDH10Q9Y6N8 788 aa5.44□□□□□ -1.54
SDC4P-201ENST00000453285 ARHGAP21Q5T5U3 1957 aa5.44□□□□□ -1.54
SDC4P-201ENST00000453285 PTPRQQ9UMZ3 2332 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SVILO95425 2214 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TRAV27A0A087WT01 109 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 A0A0G2JMM0 328 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 A0A1W2PPB8 328 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 A0A1W2PRS3 328 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 PINLYPA6NC86 204 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 KIR3DP1A8MWS1 328 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SHISA8B8ZZ34 492 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SLC1A7O00341 560 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 BHLHE40O14503 412 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CDK2AP1O14519 115 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 PRKYO43930 277 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SUSD5O60279 629 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 ZIC3O60481 467 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 HCN1O60741 890 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 FZD7O75084 574 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SMNDC1O75940 238 aaKnown RBP eCLIP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 NEURL1O76050 574 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 RCBTB2O95199 551 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SNX4O95219 450 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 WDPCPO95876 746 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CH25HO95992 272 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 BGLAPP02818 100 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CCDC159P0C7I6 412 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 ASAH2BP0C7U1 165 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CCNA2P20248 432 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 IL11P20809 199 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CNR1P21554 472 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CXCR1P25024 350 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 ITGA3P26006 1051 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 FMO3P31513 532 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 APOBEC1P41238 236 aaKnown RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 HTR3AP46098 478 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SLC9A3P48764 834 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 DNASE1L1P49184 302 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CYB561P49447 251 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SMSP52788 366 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 RRADP55042 308 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CDH15P55291 814 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TPD52P55327 224 aaPredicted RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SNRPGP62308 76 aaKnown RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 RPS4XP62701 263 aaKnown RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TEKQ02763 1124 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 FOXF1Q12946 379 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TOP3AQ13472 1001 aaPredicted RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TUBA3CQ13748 450 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SMN1Q16637 294 aaKnown RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TMEM44Q2T9K0 475 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 ZBED5Q49AG3 693 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TMEM201Q5SNT2 666 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SLC25A30Q5SVS4 291 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 ZNF362Q5T0B9 420 aaPredicted RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 ABHD17BQ5VST6 288 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TIGD3Q6B0B8 471 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SPINK14Q6IE38 97 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SLC27A4Q6P1M0 643 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TMEM154Q6P9G4 183 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TUBA3EQ6PEY2 450 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SMARCD3Q6STE5 483 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 OAFQ86UD1 273 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CYP4Z2PQ8N1L4 340 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 DEPDC4Q8N2C3 294 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 GALNT16Q8N428 558 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 FAM26EQ8N5C1 309 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 LRRC75AQ8NAA5 344 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 CLEC1AQ8NC01 280 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 PSD4Q8NDX1 1056 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 OR6S1Q8NH40 331 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 OR51A7Q8NH64 312 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TEX47Q8TBZ9 253 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 STK35Q8TDR2 534 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TRUB1Q8WWH5 349 aaKnown RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SGCDQ92629 289 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 MRGPRX4Q96LA9 322 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 DOCK7Q96N67 2140 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 GNRHR2Q96P88 292 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 MOGAT1Q96PD6 335 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SIGLEC12Q96PQ1 595 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SIGLEC11Q96RL6 698 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SCNM1Q9BWG6 230 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 POLDIP3Q9BY77 421 aaKnown RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 ING2Q9H160 280 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 UBQLN3Q9H347 655 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 DUSP21Q9H596 190 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 ZNF552Q9H707 407 aaPredicted RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 HHATLQ9HCP6 504 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 RASSF1Q9NS23 344 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 SACM1LQ9NTJ5 587 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 PLCXD1Q9NUJ7 323 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 PAK1IP1Q9NWT1 392 aaPredicted RBP5.43□□□□□ -1.54
SDC4P-201ENST00000453285 TVP23BQ9NYZ1 205 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 PLA2G3Q9NZ20 509 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 LRFN1Q9P244 771 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 IL20RAQ9UHF4 553 aa5.43□□□□□ -1.54
SDC4P-201ENST00000453285 VDAC3Q9Y277 283 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms