RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 TEX13CA0A0J9YWL9 993 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 A0A1B0GWA3 101 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 GPR75O95800 540 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 TFP02787 698 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 HOXC4P09017 264 aaPredicted RBP15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 CD3GP09693 182 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 ANXA3P12429 323 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 SNRPBP14678 240 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 GABRA3P34903 492 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 RBM34P42696 430 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 PITPNAQ00169 270 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 CDK5R1Q15078 307 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 CEP78Q5JTW2 689 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 FIGLAQ6QHK4 219 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 BAIAP2L2Q6UXY1 529 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 RTL4Q6ZR62 310 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 TMEFF1Q8IYR6 380 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 ZNF655Q8N720 491 aaPredicted RBP15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 BMPERQ8N8U9 685 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 SMIM19Q96E16 107 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 CITED4Q96RK1 184 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 C7orf50Q9BRJ6 194 aaKnown RBP15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 B3GNT2Q9NY97 397 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 SERTAD3Q9UJW9 196 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 RNF215Q9Y6U7 377 aa15.09■□□□□ 0.01
CLCNKA-203ENST00000439316 POM121BA6NF01 834 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 CYR61O00622 381 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 NGFRP08138 427 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 CT62P0C5K7 136 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 EPXP11678 715 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 RAG2P55895 527 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 TP53I3Q53FA7 332 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 FAM209AQ5JX71 171 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 ZBTB37Q5TC79 503 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 PRSS41Q7RTY9 318 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 SYS1Q8N2H4 156 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 OR4D9Q8NGE8 314 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 ZNF431Q8TF32 576 aaPredicted RBP15.08■□□□□ 0
CLCNKA-203ENST00000439316 ADAMTS14Q8WXS8 1223 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 RSC1A1Q92681 617 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 HOXB13Q92826 284 aaPredicted RBP15.08■□□□□ 0
CLCNKA-203ENST00000439316 CTHRC1Q96CG8 243 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 PELI1Q96FA3 418 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 LRFN5Q96NI6 719 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 ELF5Q9UKW6 265 aaPredicted RBP15.08■□□□□ 0
CLCNKA-203ENST00000439316 ICAM5Q9UMF0 924 aa15.08■□□□□ 0
CLCNKA-203ENST00000439316 A0A0B4J203 849 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 A6NCN8 305 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 ANKRD61A6NGH8 418 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 LRRN3E7EW58 273 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 FLRT2O43155 660 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 GSTZ1O43708 216 aaPredicted RBP15.07■□□□□ 0
CLCNKA-203ENST00000439316 ARL6IP5O75915 188 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 NKX2-2O95096 273 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 UCHL1P09936 223 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 GIFP27352 417 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 GDI2P50395 445 aaKnown RBP15.07■□□□□ 0
CLCNKA-203ENST00000439316 ACTA2P62736 377 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 ACTG2P63267 376 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 GGTLC2Q14390 218 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 UBXN2BQ14CS0 331 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 ENPP7Q6UWV6 458 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 GRAMD2AQ8IUY3 354 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 OR51Q1Q8NH59 317 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 CCL4L1Q8NHW4 92 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 THAP4Q8WY91 577 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 ZFYVE21Q9BQ24 234 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 CACNG6Q9BXT2 260 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 LRRN3Q9H3W5 708 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 ACTR10Q9NZ32 417 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 CHRNA9Q9UGM1 479 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 TEKT2Q9UIF3 430 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 ZNF222Q9UK12 451 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 MGAT4AQ9UM21 535 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 CAMK2AQ9UQM7 478 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 SPACA6W5XKT8 324 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 USP34Q70CQ2 3546 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 SYNDIG1LA6NDD5 238 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 H0YGG7 62 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 CTDSPLO15194 276 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 NOS1APO75052 506 aaPredicted RBP15.07■□□□□ 0
CLCNKA-203ENST00000439316 ADAM11O75078 769 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 CD1AP06126 327 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 PER3P56645 1201 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 ARPC4P59998 168 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 ARF3P61204 181 aaPredicted RBP15.07■□□□□ 0
CLCNKA-203ENST00000439316 RPS11P62280 158 aaKnown RBP eCLIP15.07■□□□□ 0
CLCNKA-203ENST00000439316 KLF9Q13886 244 aaPredicted RBP15.07■□□□□ 0
CLCNKA-203ENST00000439316 NFATC4Q14934 902 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 RNASE12Q5GAN4 147 aaKnown RBP15.07■□□□□ 0
CLCNKA-203ENST00000439316 SYT13Q7L8C5 426 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 CMIPQ8IY22 773 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 POMGNT2Q8NAT1 580 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 HGDQ93099 445 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 ZMYND19Q96E35 227 aaPredicted RBP15.07■□□□□ 0
CLCNKA-203ENST00000439316 MED30Q96HR3 178 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 PTCHD1Q96NR3 888 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 CNN2Q99439 309 aaKnown RBP15.07■□□□□ 0
CLCNKA-203ENST00000439316 FOXQ1Q9C009 403 aa15.07■□□□□ 0
CLCNKA-203ENST00000439316 SPATA2Q9UM82 520 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms