RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 ZNF362Q5T0B9 420 aaPredicted RBP13.83□□□□□ -0.2
ACTB-204ENST00000425660 B3GNT6Q6ZMB0 384 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 CCDC81Q6ZN84 652 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 GRINAQ7Z429 371 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 OR10G3Q8NGC4 313 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 NMD3Q96D46 503 aaKnown RBP13.83□□□□□ -0.2
ACTB-204ENST00000425660 GPX7Q96SL4 187 aaPredicted RBP13.83□□□□□ -0.2
ACTB-204ENST00000425660 ZNF160Q9HCG1 818 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 GALNT9Q9HCQ5 603 aa13.83□□□□□ -0.2
ACTB-204ENST00000425660 YARS2Q9Y2Z4 477 aaKnown RBP13.83□□□□□ -0.2
ACTB-204ENST00000425660 LRRN3E7EW58 273 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 TRMUO75648 421 aaKnown RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 SLC2A10O95528 541 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 NUDT14O95848 222 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 LCKP06239 509 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 TSPAN19P0C672 248 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 ASAH2BP0C7U1 165 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 ADORA3P0DMS8 318 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 GP1BBP13224 206 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 ST13P50502 369 aaKnown RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 POLR2HP52434 150 aaKnown RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 MLLT10P55197 1068 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 PRPS1P60891 318 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 RAB40BQ12829 278 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 SNTA1Q13424 505 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 ANKDD1AQ495B1 522 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 ASCL5Q7RTU5 278 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 DND1Q8IYX4 353 aaKnown RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 LRRC17Q8N6Y2 441 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 NLGN4YQ8NFZ3 816 aaPredicted RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 RAB2BQ8WUD1 216 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 ST8SIA1Q92185 356 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 C12orf43Q96C57 262 aaKnown RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 CRELD1Q96HD1 420 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 TMEM80Q96HE8 168 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 FRMD6Q96NE9 622 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 SECISBP2Q96T21 854 aaKnown RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 IFT27Q9BW83 186 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 FUNDC2Q9BWH2 189 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 IRF2BPLQ9H1B7 796 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 CPNE5Q9HCH3 593 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 HINT3Q9NQE9 182 aaKnown RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 TAS2R10Q9NYW0 307 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 DIMT1Q9UNQ2 313 aaKnown RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 HIF3AQ9Y2N7 669 aa13.82□□□□□ -0.2
ACTB-204ENST00000425660 CHCHD2Q9Y6H1 151 aaPredicted RBP13.82□□□□□ -0.2
ACTB-204ENST00000425660 SDK2Q58EX2 2172 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 IRGMA1A4Y4 181 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 H3BMQ9 156 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 NPIPB7O75200 414 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 HPP00738 406 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 CXCR1P25024 350 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 MSX1P28360 303 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 SOX3P41225 446 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 CASP3P42574 277 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 HTR3AP46098 478 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 MTNR1AP48039 350 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 KLHL22Q53GT1 634 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 OPN5Q6U736 354 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 ANKRD13BQ86YJ7 626 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 DEFB124Q8NES8 71 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 TMEM234Q8WY98 164 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 COG8Q96MW5 612 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 NAA50Q9GZZ1 169 aaKnown RBP13.81□□□□□ -0.2
ACTB-204ENST00000425660 KLRF1Q9NZS2 232 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 CHRNA9Q9UGM1 479 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 WIF1Q9Y5W5 379 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 DMXL1Q9Y485 3027 aa13.81□□□□□ -0.2
ACTB-204ENST00000425660 ARPC3O15145 178 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 GMFGO60234 142 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 WISP1O95388 367 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 PTHP01270 115 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 FTH1P19P0C7X4 201 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 HTR1FP30939 366 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 CDH11P55287 796 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 CHAF1BQ13112 559 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 DNASE1L3Q13609 305 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 BICRALQ6AI39 1079 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 ARHGAP11AQ6P4F7 1023 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 DPY19L2P2Q6ZN68 376 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 ADGRG3Q86Y34 549 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 NTNG2Q96CW9 530 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 YIPF6Q96EC8 236 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 KTI12Q96EK9 354 aaPredicted RBP13.8□□□□□ -0.2
ACTB-204ENST00000425660 MOGAT1Q96PD6 335 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 TSC22D3Q99576 134 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 BCL7BQ9BQE9 202 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 FGF20Q9NP95 211 aaPredicted RBP13.8□□□□□ -0.2
ACTB-204ENST00000425660 NRIP3Q9NQ35 241 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 NANSQ9NR45 359 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 SDHAF3Q9NRP4 125 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 WARS2Q9UGM6 360 aaKnown RBP13.8□□□□□ -0.2
ACTB-204ENST00000425660 TP53I11O14683 189 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 MAN1A2O60476 641 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 TNFSF15O95150 251 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 PRKCAP17252 672 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 F8A1P23610 371 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 PSMB9P28065 219 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 PCSK6P29122 969 aa13.8□□□□□ -0.2
ACTB-204ENST00000425660 UQCRC1P31930 480 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms