RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 HCN1O60741 890 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 OR7A10O76100 309 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 P04436 131 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 GABRB1P18505 474 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SLC9A3P48764 834 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 DNASE1L1P49184 302 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 PCYT1AP49585 367 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 FOXK1P85037 733 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 CLN3Q13286 438 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SNTA1Q13424 505 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 ZBED5Q49AG3 693 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SLC35F1Q5T1Q4 408 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 JMJD6Q6NYC1 403 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SLC46A3Q7Z3Q1 461 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 ADGRG3Q86Y34 549 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 DND1Q8IYX4 353 aaKnown RBP11.29□□□□□ -0.6
CHMP3-204ENST00000409727 ZNF540Q8NDQ6 660 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 OR2T33Q8NG76 320 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 TAAR8Q969N4 342 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 NXPE2Q96DL1 559 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SGCZQ96LD1 299 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 GNRHR2Q96P88 292 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 ANGPTL4Q9BY76 406 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SLC19A3Q9BZV2 496 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 CCDC90BQ9GZT6 254 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 UBQLN3Q9H347 655 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SLC25A19Q9HC21 320 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 PROK2Q9HC23 129 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 MCCC2Q9HCC0 563 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 CPNE5Q9HCH3 593 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 PAK1IP1Q9NWT1 392 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-204ENST00000409727 PLA2G3Q9NZ20 509 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 BLOC1S6Q9UL45 172 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 DOCK10Q96BY6 2186 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 BLOC1S5-TXNDC5H3BN57 136 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 RCBTB2O95199 551 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SLC2A10O95528 541 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 IL11P20809 199 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 MSX1P28360 303 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 HLCSP50747 726 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 TOP3AQ13472 1001 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-204ENST00000409727 APOFQ13790 326 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 ZNF74Q16587 644 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 PGGHGQ32M88 737 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 AHSA2Q719I0 299 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 GALNT16Q8N428 558 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 PSD4Q8NDX1 1056 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 OR1J4Q8NGS1 313 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 ST8SIA1Q92185 356 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 OTULINQ96BN8 352 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SLC25A36Q96CQ1 311 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SLC38A2Q96QD8 506 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 CCNL2Q96S94 520 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SECISBP2Q96T21 854 aaKnown RBP11.29□□□□□ -0.6
CHMP3-204ENST00000409727 YTHDF1Q9BYJ9 559 aaKnown RBP11.29□□□□□ -0.6
CHMP3-204ENST00000409727 PTGES2Q9H7Z7 377 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 C12orf10Q9HB07 376 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 HHATLQ9HCP6 504 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 NANSQ9NR45 359 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 CLN6Q9NWW5 311 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 SCN3BQ9NY72 215 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 LRFN1Q9P244 771 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 RPH3AQ9Y2J0 694 aaPredicted RBP11.29□□□□□ -0.6
CHMP3-204ENST00000409727 ZNF337Q9Y3M9 751 aa11.29□□□□□ -0.6
CHMP3-204ENST00000409727 IGLV3-32A0A0A0MS00 114 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 DPPA5A6NC42 116 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 FAM47E-STBD1D6RA91 191 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 MPZL2O60487 215 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 ENTPD6O75354 484 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 PTP4A3O75365 173 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 PPP1R3DO95685 299 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 OPN1LWP04000 364 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 RPL4P36578 427 aaKnown RBP11.28□□□□□ -0.6
CHMP3-204ENST00000409727 CD96P40200 585 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 HTR3AP46098 478 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 LTBQ06643 244 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 DBPQ10586 325 aaPredicted RBP11.28□□□□□ -0.6
CHMP3-204ENST00000409727 FHL1Q13642 323 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 TOMM20Q15388 145 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 PLPPR5Q32ZL2 321 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 TBC1D25Q3MII6 688 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 ZNF227Q86WZ6 799 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 PLCZ1Q86YW0 608 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 CLDN22Q8N7P3 220 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 C1GALT1C1Q96EU7 318 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 PLEKHA8Q96JA3 519 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 LRR1Q96L50 414 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 TEX12Q9BXU0 123 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 TMEM185BQ9H7F4 350 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 SACM1LQ9NTJ5 587 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 GPR83Q9NYM4 423 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 ABI3Q9P2A4 366 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 ERVK-18Q9QC07 812 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 TPRKBQ9Y3C4 175 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 CPAMD8Q8IZJ3 1885 aa11.28□□□□□ -0.6
CHMP3-204ENST00000409727 A0A087WXM4 84 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 H3BML4 177 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 WDPCPO95876 746 aa11.27□□□□□ -0.6
CHMP3-204ENST00000409727 CCDC159P0C7I6 412 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms