RNA–Protein interactions for RNA: ENST00000398317.2

NIFKP1-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 1, humanhuman

BASIC

Gene NIFKP1, Length 889 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP1-201ENST00000398317 ACER3Q9NUN7 267 aa8.65□□□□□ -1.02
NIFKP1-201ENST00000398317 ARFGEF3Q5TH69 2177 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 MALRD1Q5VYJ5 2156 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 A0A1W2PR80 420 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 WDR91A4D1P6 747 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 DUXAA6NLW8 204 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 SULT2B1O00204 365 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 ABCD4O14678 606 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 ITM2AO43736 263 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 SSX4O60224 188 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 DNAJA2O60884 412 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 STX11O75558 287 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 RAD51DO75771 328 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 CPSF4O95639 269 aaKnown RBP8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 AK1P00568 194 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 TP53P04637 393 aaPredicted RBP8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 F13BP05160 661 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 OR12D1P0DN82 309 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 TFPIP10646 304 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 GGT1P19440 569 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 PGCP20142 388 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 COX5AP20674 150 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 RYKP34925 604 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 EMX2Q04743 252 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 IFFO1Q0D2I5 559 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 PDCD2Q16342 344 aaPredicted RBP8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 SYT14P1Q58G82 188 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 TIMM23BQ5SRD1 257 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 TNFAIP8L2Q6P589 184 aaPredicted RBP8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 EIF3MQ7L2H7 374 aaKnown RBP8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 DTX2Q86UW9 622 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 ANKRD46Q86W74 232 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 UBE2J2Q8N2K1 259 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 RIBC1Q8N443 379 aaPredicted RBP8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 OR4A15Q8NGL6 344 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 OR52N5Q8NH56 324 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 ZNF563Q8TA94 476 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 XAGE5Q8WWM1 108 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 TMEM234Q8WY98 164 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 RAB8BQ92930 207 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 ZG16BQ96DA0 208 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 ARL5BQ96KC2 179 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 PKNOX2Q96KN3 472 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 HS6ST2Q96MM7 605 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 ZNF350Q9GZX5 532 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 YAE1D1Q9NRH1 226 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 LGALS13Q9UHV8 139 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 B3GALT5Q9Y2C3 310 aa8.64□□□□□ -1.03
NIFKP1-201ENST00000398317 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CIB4A0PJX0 185 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 OR5H1A6NKK0 313 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CCT8L1PA6NM43 557 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CLDN24A6NM45 220 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 E7EQL1 145 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 RNASET2O00584 256 aaKnown RBP8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CD5LO43866 347 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 KIAA0513O60268 411 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 PGM3O95394 542 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 C1QCP02747 245 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 NUDT17P0C025 328 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CCNA2P20248 432 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 NTF4P34130 210 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 PGM1P36871 562 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 SERPINB5P36952 375 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 ZNF83P51522 516 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 FOXG1P55316 489 aaPredicted RBP8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CSNK2A1P68400 391 aaPredicted RBP8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 PHC1P78364 1004 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 IRX1P78414 480 aaPredicted RBP8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CHRNEQ04844 493 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 SPOCK1Q08629 439 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 FUT5Q11128 374 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 MAD2L1Q13257 205 aaPredicted RBP8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 ATAD3BQ5T9A4 648 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 FBXW9Q5XUX1 488 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 ABLIM2Q6H8Q1 611 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 TYW3Q6IPR3 259 aaKnown RBP8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 HMBOX1Q6NT76 420 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 DNM1P46Q6ZS02 220 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 MTDHQ86UE4 582 aaKnown RBP8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 NUDCD3Q8IVD9 361 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CCDC103Q8IW40 242 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 ZNF781Q8N8C0 355 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 SPATA3Q8NHX4 192 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 HTRA1Q92743 480 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CCDC106Q9BWC9 280 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 C1QTNF6Q9BXI9 259 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 CACNG6Q9BXT2 260 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 DPY30Q9C005 99 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 OR11A1Q9GZK7 315 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 EXD2Q9NVH0 621 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 EMC3Q9P0I2 261 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 PCDHGB4Q9UN71 923 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 NOSIPQ9Y314 301 aaKnown RBP8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 WDR45Q9Y484 360 aa8.63□□□□□ -1.03
NIFKP1-201ENST00000398317 IGHV4-30-2A0A087WSY4 118 aa8.62□□□□□ -1.03
NIFKP1-201ENST00000398317 IGKV3D-15A0A087WSY6 115 aa8.62□□□□□ -1.03
NIFKP1-201ENST00000398317 PRAMEF27A3QJZ7 478 aa8.62□□□□□ -1.03
NIFKP1-201ENST00000398317 ZNF716A6NP11 495 aa8.62□□□□□ -1.03
NIFKP1-201ENST00000398317 TYROBPO43914 113 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms