RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 WNT4P56705 351 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 CRMP1Q14194 572 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 ZNF74Q16587 644 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 DGUOKQ16854 277 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 SOWAHCQ53LP3 525 aaPredicted RBP18.22■□□□□ 0.51
RTN1-202ENST00000342503 OR2G6Q5TZ20 316 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 B3GLCTQ6Y288 498 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 C10orf53Q8N6V4 93 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 HGDQ93099 445 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 DCSTAMPQ9H295 470 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 RNF167Q9H6Y7 350 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 IER3IP1Q9Y5U9 82 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 NCOR1O75376 2440 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 CCDC182A6NF36 153 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 CD79BP40259 229 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 LIMK1P53667 647 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 RPS4XP62701 263 aaKnown RBP18.21■□□□□ 0.51
RTN1-202ENST00000342503 DBPQ10586 325 aaPredicted RBP18.21■□□□□ 0.51
RTN1-202ENST00000342503 KLHL12Q53G59 568 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 CCDC157Q569K6 752 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 LHFPL3Q86UP9 236 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 SIRT6Q8N6T7 355 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 GALNT6Q8NCL4 622 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 OR51G2Q8NGK0 314 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 B4GALNT2Q8NHY0 566 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 DUSP19Q8WTR2 217 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 KISS1RQ969F8 398 aaPredicted RBP18.21■□□□□ 0.51
RTN1-202ENST00000342503 MOGAT1Q96PD6 335 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 CENPOQ9BU64 300 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 TNFRSF10DQ9UBN6 386 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 OSGIN1Q9UJX0 560 aa18.21■□□□□ 0.51
RTN1-202ENST00000342503 PTRH2Q9Y3E5 179 aaKnown RBP18.21■□□□□ 0.51
RTN1-202ENST00000342503 LOC102723996A0A087X1L8 192 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 C9J4A7 227 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 J3QRE1 110 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 IFNGP01579 166 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 IGHA1P01876 353 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 UMODP07911 640 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 INHBBP09529 407 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 GP1BBP13224 206 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 CD59P13987 128 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 ATP6V1E1P36543 226 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 RPL4P36578 427 aaKnown RBP18.2■□□□□ 0.5
RTN1-202ENST00000342503 RPS3AP61247 264 aaKnown RBP18.2■□□□□ 0.5
RTN1-202ENST00000342503 LTBQ06643 244 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 PCOLCEQ15113 449 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 SF3A2Q15428 464 aaKnown RBP18.2■□□□□ 0.5
RTN1-202ENST00000342503 MOGQ16653 247 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 DPY19L2P2Q6ZN68 376 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 USP43Q70EL4 1123 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 ADCK1Q86TW2 530 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 CYB561A3Q8NBI2 242 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 OR52E2Q8NGJ4 325 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 MOSPD2Q8NHP6 518 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 GPR119Q8TDV5 335 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 LIPHQ8WWY8 451 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 GATAD2BQ8WXI9 593 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 KTI12Q96EK9 354 aaPredicted RBP18.2■□□□□ 0.5
RTN1-202ENST00000342503 CMKLR1Q99788 373 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 OR51V1Q9H2C8 321 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 AKAP7Q9P0M2 348 aaPredicted RBP18.2■□□□□ 0.5
RTN1-202ENST00000342503 PMF1-BGLAPU3KQ54 211 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 CDX4O14627 284 aaPredicted RBP18.2■□□□□ 0.5
RTN1-202ENST00000342503 CDC40O60508 579 aaKnown RBP eCLIP18.2■□□□□ 0.5
RTN1-202ENST00000342503 GPX5O75715 221 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 WISP1O95388 367 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 HIST1H1CP16403 213 aaKnown RBP18.2■□□□□ 0.5
RTN1-202ENST00000342503 SLC2A5P22732 501 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 CXCR1P25024 350 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.2■□□□□ 0.5
RTN1-202ENST00000342503 QPRTQ15274 297 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 POMZP3Q6PJE2 187 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 MISPQ8IVT2 679 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 PSD4Q8NDX1 1056 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 TMCO6Q96DC7 493 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 SECISBP2Q96T21 854 aaKnown RBP18.2■□□□□ 0.5
RTN1-202ENST00000342503 ZNF649Q9BS31 505 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 JAM3Q9BX67 310 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 MMP25Q9NPA2 562 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 KLHL21Q9UJP4 597 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 ADAM18Q9Y3Q7 739 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 LOXL2Q9Y4K0 774 aa18.2■□□□□ 0.5
RTN1-202ENST00000342503 CLUP10909 449 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 NAGAP17050 411 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 PAICSP22234 425 aaKnown RBP18.19■□□□□ 0.5
RTN1-202ENST00000342503 RPS7P62081 194 aaKnown RBP18.19■□□□□ 0.5
RTN1-202ENST00000342503 TMED1Q13445 227 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 DCTN2Q13561 401 aaKnown RBP18.19■□□□□ 0.5
RTN1-202ENST00000342503 TIMM50Q3ZCQ8 353 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 ARMC4Q5T2S8 1044 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 LIPKQ5VXJ0 399 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 ZNF517Q6ZMY9 492 aaPredicted RBP18.19■□□□□ 0.5
RTN1-202ENST00000342503 FAM98AQ8NCA5 519 aaKnown RBP18.19■□□□□ 0.5
RTN1-202ENST00000342503 OR4K13Q8NH42 304 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 TEAD3Q99594 435 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 ISYNA1Q9NPH2 558 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 NANSQ9NR45 359 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 NDUFB11Q9NX14 153 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 ERVK13-1Q9NX77 482 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 MYOTQ9UBF9 498 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms