RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PGS1Q32NB8 556 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 ARHGAP11BQ3KRB8 267 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 ZNF544Q6NX49 715 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 OLIG3Q7RTU3 272 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 C6orf120Q7Z4R8 191 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 CLECL1Q8IZS7 167 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 FAM71CQ8NEG0 241 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 ZNF563Q8TA94 476 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 SLC35G5Q96KT7 338 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 CCDC106Q9BWC9 280 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 EXD2Q9NVH0 621 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 TMEM160Q9NX00 188 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 SLC35A3Q9Y2D2 325 aa13.73□□□□□ -0.21
LINC01116-202ENST00000339037 RGS16O15492 202 aaPredicted RBP13.72□□□□□ -0.21
LINC01116-202ENST00000339037 LILRA1O75019 489 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 PMS2P2O95744 297 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 SERPINE1P05121 402 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 CSF3P09919 207 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 RYKP34925 604 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 PGM1P36871 562 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 SLC16A1P53985 500 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 CLDN8P56748 225 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 EMX2Q04743 252 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 MAD2L1Q13257 205 aaPredicted RBP13.72□□□□□ -0.21
LINC01116-202ENST00000339037 GABRA6Q16445 453 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 MAPK14Q16539 360 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 OR4F3Q6IEY1 312 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 GRINAQ7Z429 371 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 CLEC4FQ8N1N0 589 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 C10orf105Q8TEF2 133 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 OIT3Q8WWZ8 545 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 DNAJA3Q96EY1 480 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 ARL5BQ96KC2 179 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 MUS81Q96NY9 551 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 SORT1Q99523 831 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 C1QTNF6Q9BXI9 259 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 PARD6BQ9BYG5 372 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 FKRPQ9H9S5 495 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 CTPS2Q9NRF8 586 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 ASIC5Q9NY37 505 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 NOP53Q9NZM5 478 aaKnown RBP13.72□□□□□ -0.21
LINC01116-202ENST00000339037 LPAR3Q9UBY5 353 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 HDGFL3Q9Y3E1 203 aa13.72□□□□□ -0.21
LINC01116-202ENST00000339037 BCAS1O75363 584 aaPredicted RBP13.71□□□□□ -0.21
LINC01116-202ENST00000339037 AGR2O95994 175 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 ITGA5P08648 1049 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 ZNF16P17020 682 aaPredicted RBP13.71□□□□□ -0.21
LINC01116-202ENST00000339037 FKBP2P26885 142 aaKnown RBP13.71□□□□□ -0.21
LINC01116-202ENST00000339037 NTF4P34130 210 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 MAGEA8P43361 318 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 EFNA4P52798 201 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 ABCE1P61221 599 aaKnown RBP13.71□□□□□ -0.21
LINC01116-202ENST00000339037 CHRNB3Q05901 458 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 MPP2Q14168 576 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 ATAD3BQ5T9A4 648 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 CYB5R2Q6BCY4 276 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 CASP12Q6UXS9 341 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 CCDC103Q8IW40 242 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 OR52E4Q8NGH9 312 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 ZIM3Q96PE6 472 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 AMBRA1Q9C0C7 1298 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 OR11A1Q9GZK7 315 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 SHARPINQ9H0F6 387 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 OR51I1Q9H343 314 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 AKTIPQ9H8T0 292 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 SSU72Q9NP77 194 aaKnown RBP13.71□□□□□ -0.21
LINC01116-202ENST00000339037 RAP2CQ9Y3L5 183 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 WDR45Q9Y484 360 aa13.71□□□□□ -0.21
LINC01116-202ENST00000339037 RNASET2O00584 256 aaKnown RBP13.7□□□□□ -0.22
LINC01116-202ENST00000339037 BIRC5O15392 142 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 IGHV4-31P0DP07 118 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 BGNP21810 368 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 USF1P22415 310 aaPredicted RBP13.7□□□□□ -0.22
LINC01116-202ENST00000339037 CLK1P49759 484 aaKnown RBP13.7□□□□□ -0.22
LINC01116-202ENST00000339037 FOXG1P55316 489 aaPredicted RBP13.7□□□□□ -0.22
LINC01116-202ENST00000339037 OR2B6P58173 313 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 TGFBR3Q03167 851 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 SMU1Q2TAY7 513 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 C9orf135Q5VTT2 229 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 TYW3Q6IPR3 259 aaKnown RBP13.7□□□□□ -0.22
LINC01116-202ENST00000339037 C17orf78Q8N4C9 275 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 C1orf162Q8NEQ5 155 aaPredicted RBP13.7□□□□□ -0.22
LINC01116-202ENST00000339037 OR4A15Q8NGL6 344 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 MIPOL1Q8TD10 442 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 PROX1Q92786 737 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 CENPHQ9H3R5 247 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 POLE3Q9NRF9 147 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 UPB1Q9UBR1 384 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 PCDHGB4Q9UN71 923 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 ATP23Q9Y6H3 246 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 PMF1-BGLAPU3KQ54 211 aa13.7□□□□□ -0.22
LINC01116-202ENST00000339037 PDLIM1O00151 329 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 TM9SF1O15321 606 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 ZNF500O60304 480 aaPredicted RBP13.69□□□□□ -0.22
LINC01116-202ENST00000339037 LY6HO94772 140 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 GUSBP08236 651 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 MYZAPP0CAP1 466 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 OR12D1P0DN82 309 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 CCNA2P20248 432 aa13.69□□□□□ -0.22
LINC01116-202ENST00000339037 SLC1A6P48664 564 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms