RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 LOC101059948A0A1B0GTJ6 334 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 PROB1E7EW31 1015 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 STMND1H3BQB6 276 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 ZNF701M0R085 212 aaPredicted RBP14.87□□□□□ -0.03
TPM1-201ENST00000267996 TP53I11O14683 189 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 PRODHO43272 600 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 GMFGO60234 142 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 NPIPB7O75200 414 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 INMTO95050 263 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 NUDT14O95848 222 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 CH25HO95992 272 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 CXCR1P25024 350 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 SLC6A6P31641 620 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 GP2P55259 537 aaKnown RBP14.87□□□□□ -0.03
TPM1-201ENST00000267996 Q0VFX4 171 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 SNTA1Q13424 505 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 TBCEQ15813 527 aaPredicted RBP14.87□□□□□ -0.03
TPM1-201ENST00000267996 TMEM44Q2T9K0 475 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 SYT6Q5T7P8 510 aaPredicted RBP14.87□□□□□ -0.03
TPM1-201ENST00000267996 UBE2UQ5VVX9 321 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 ADGRG3Q86Y34 549 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 STX19Q8N4C7 294 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 LRRC17Q8N6Y2 441 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 ANKK1Q8NFD2 765 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 TMEM234Q8WY98 164 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 RORBQ92753 470 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 FRMD6Q96NE9 622 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 FN3KQ9H479 309 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 CMC2Q9NRP2 79 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 KLRF1Q9NZS2 232 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 GPR52Q9Y2T5 361 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 HRH3Q9Y5N1 445 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 WIF1Q9Y5W5 379 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 C2orf72A6NCS6 295 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 ZNF99A8MXY4 864 aaPredicted RBP14.87□□□□□ -0.03
TPM1-201ENST00000267996 LRRN3E7EW58 273 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 NDUFB2O95178 105 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 WISP1O95388 367 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 FADS2O95864 444 aaKnown RBP14.87□□□□□ -0.03
TPM1-201ENST00000267996 SERPINA7P05543 415 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 ADRA2AP08913 450 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 HTR3AP46098 478 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 SSR4P51571 173 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 MLLT10P55197 1068 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 FOXK2Q01167 660 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 LTBQ06643 244 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 IL10RAQ13651 578 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 ZNF362Q5T0B9 420 aaPredicted RBP14.87□□□□□ -0.03
TPM1-201ENST00000267996 FCGR1BQ92637 280 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 PLEKHA8Q96JA3 519 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 IFT27Q9BW83 186 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 METTL7AQ9H8H3 244 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 SH2D2AQ9NP31 389 aa14.87□□□□□ -0.03
TPM1-201ENST00000267996 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 TMED7-TICAM2A0A0A6YYA0 188 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 MASP2O00187 686 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 SLC2A10O95528 541 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 TSPAN19P0C672 248 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 ASAH2BP0C7U1 165 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 PEPDP12955 493 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 PRKCAP17252 672 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 CD82P27701 267 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 DCKP27707 260 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 ANKDD1AQ495B1 522 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 RNLSQ5VYX0 342 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 FCRLBQ6BAA4 426 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 OR5M10Q6IEU7 315 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 CLVS1Q8IUQ0 354 aaPredicted RBP14.86□□□□□ -0.03
TPM1-201ENST00000267996 C9orf43Q8TAL5 461 aaPredicted RBP14.86□□□□□ -0.03
TPM1-201ENST00000267996 ZNF420Q8TAQ5 688 aaPredicted RBP14.86□□□□□ -0.03
TPM1-201ENST00000267996 ADAMTS17Q8TE56 1095 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 ASB15Q8WXK1 588 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 KTI12Q96EK9 354 aaPredicted RBP14.86□□□□□ -0.03
TPM1-201ENST00000267996 MOGAT1Q96PD6 335 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 GPX7Q96SL4 187 aaPredicted RBP14.86□□□□□ -0.03
TPM1-201ENST00000267996 DOK1Q99704 481 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 HINT3Q9NQE9 182 aaKnown RBP14.86□□□□□ -0.03
TPM1-201ENST00000267996 MED11Q9P086 117 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 PPP4R1LQ9P1A2 415 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 RSL24D1Q9UHA3 163 aaKnown RBP14.86□□□□□ -0.03
TPM1-201ENST00000267996 HIF3AQ9Y2N7 669 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 TMED7Q9Y3B3 224 aa14.86□□□□□ -0.03
TPM1-201ENST00000267996 TRAV36DV7A0A075B6V5 113 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 SNTNA6NMZ2 147 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 CDRT15L2A8MXV6 281 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 GABREP78334 506 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 SLC25A53Q5H9E4 307 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 NXNL2Q5VZ03 156 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 IL20RBQ6UXL0 311 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 DPY19L2P2Q6ZN68 376 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 RAB43Q86YS6 212 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 STK35Q8TDR2 534 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 NKD1Q969G9 470 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 TAAR8Q969N4 342 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 CHRNA9Q9UGM1 479 aa14.85□□□□□ -0.03
TPM1-201ENST00000267996 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.85□□□□□ -0.03
TPM1-201ENST00000267996 CNOT1A5YKK6 2376 aaKnown RBP14.85□□□□□ -0.03
TPM1-201ENST00000267996 TMEM72A0PK05 275 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 CCDC160A6NGH7 325 aa14.84□□□□□ -0.03
TPM1-201ENST00000267996 SUSD5O60279 629 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms