RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 ARPC4-TTLL3A0A0A6YYG9 625 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 RGS5O15539 181 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 FZD7O75084 574 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 TRIM3O75382 744 aaPredicted RBP10.21□□□□□ -0.77
MSH3-201ENST00000265081 DDAH2O95865 285 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 IFNGP01579 166 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 MAOAP21397 527 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 CFPP27918 469 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 MLLT3P42568 568 aaPredicted RBP10.21□□□□□ -0.77
MSH3-201ENST00000265081 KIR2DL3P43628 341 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 OR4C3Q8NH37 302 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 ABHD4Q8TB40 342 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 PHYHIPQ92561 330 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 SMIM19Q96E16 107 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 RBM18Q96H35 190 aaKnown RBP10.21□□□□□ -0.77
MSH3-201ENST00000265081 MARCH7Q9H992 704 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 FBXL4Q9UKA2 621 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 NPFFR2Q9Y5X5 522 aa10.21□□□□□ -0.77
MSH3-201ENST00000265081 CD8B2A6NJW9 211 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 UCHL1P09936 223 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 CD8BP10966 210 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 NPR2P20594 1047 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 CD1CP29017 333 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 CAV3P56539 151 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 STARD6P59095 220 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 MAT1AQ00266 395 aaKnown RBP10.21□□□□□ -0.78
MSH3-201ENST00000265081 IFITM2Q01629 132 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 EGR4Q05215 589 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 OR8H2Q8N162 312 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 RFLNBQ8N5W9 214 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 SCAIQ8N9R8 606 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 ZNRF4Q8WWF5 429 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 ZNF524Q96C55 264 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 SLC46A1Q96NT5 459 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 TTYH1Q9H313 450 aaPredicted RBP10.21□□□□□ -0.78
MSH3-201ENST00000265081 TPK1Q9H3S4 243 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 PCDH15Q96QU1 1955 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 NCR1O76036 304 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 SAGP10523 405 aaPredicted RBP10.21□□□□□ -0.78
MSH3-201ENST00000265081 PNMTP11086 282 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 PRPS1P60891 318 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 STX4Q12846 297 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 CDK5R1Q15078 307 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 C14orf28Q4W4Y0 310 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 WBP2NLQ6ICG8 309 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 MS4A15Q8N5U1 240 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 OR5J2Q8NH18 312 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 C4orf36Q96KX1 117 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 TBC1D17Q9HA65 648 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 MKKSQ9NPJ1 570 aaPredicted RBP10.21□□□□□ -0.78
MSH3-201ENST00000265081 TIGARQ9NQ88 270 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 RBFOX1Q9NWB1 397 aaKnown RBP10.21□□□□□ -0.78
MSH3-201ENST00000265081 ERVK-19Q9WJR5 959 aa10.21□□□□□ -0.78
MSH3-201ENST00000265081 CSTF1Q05048 431 aaKnown RBP10.2□□□□□ -0.78
MSH3-201ENST00000265081 CRYZQ08257 329 aaKnown RBP10.2□□□□□ -0.78
MSH3-201ENST00000265081 TDGQ13569 410 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 P2RY14Q15391 338 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 ZNF74Q16587 644 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 LCN1P1Q5VSP4 162 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 ZC3H14Q6PJT7 736 aaKnown RBP10.2□□□□□ -0.78
MSH3-201ENST00000265081 PRSS42Q7Z5A4 293 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 LSRQ86X29 649 aaPredicted RBP10.2□□□□□ -0.78
MSH3-201ENST00000265081 RAB43Q86YS6 212 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 TCRBV16S1A1N1A0A5B0 115 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 MEIOCA2RUB1 952 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 SYNDIG1LA6NDD5 238 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 ATP6V1G1O75348 118 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 TFPIP10646 304 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 ELK1P19419 428 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 CLDN20P56880 219 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 EMC4Q5J8M3 183 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 ATAD3CQ5T2N8 411 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 D2HGDHQ8N465 521 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 TSTD1Q8NFU3 115 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 PELI1Q96FA3 418 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 MARVELD1Q9BSK0 173 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 RORAP35398 523 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 GFERP55789 205 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 SF3A2Q15428 464 aaKnown RBP10.2□□□□□ -0.78
MSH3-201ENST00000265081 CD226Q15762 336 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 SFXN4Q6P4A7 337 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 B3GLCTQ6Y288 498 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 FAM160A2Q8N612 972 aaPredicted RBP10.2□□□□□ -0.78
MSH3-201ENST00000265081 RNF138Q8WVD3 245 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 SLC41A2Q96JW4 573 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 SNX18Q96RF0 628 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 CNN2Q99439 309 aaKnown RBP10.2□□□□□ -0.78
MSH3-201ENST00000265081 LAT2Q9GZY6 243 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 SPRTNQ9H040 489 aaPredicted RBP10.2□□□□□ -0.78
MSH3-201ENST00000265081 UBQLN4Q9NRR5 601 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 ADAM30Q9UKF2 790 aa10.2□□□□□ -0.78
MSH3-201ENST00000265081 REM1O75628 298 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 GATBO75879 557 aaKnown RBP10.19□□□□□ -0.78
MSH3-201ENST00000265081 PTNP21246 168 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 OR12D2P58182 307 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 CFHR1Q03591 330 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 ZNF267Q14586 743 aaPredicted RBP10.19□□□□□ -0.78
MSH3-201ENST00000265081 GRM7Q14831 915 aa10.19□□□□□ -0.78
MSH3-201ENST00000265081 YOD1Q5VVQ6 348 aaPredicted RBP10.19□□□□□ -0.78
MSH3-201ENST00000265081 TIGD3Q6B0B8 471 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms