RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 LRR1Q96L50 414 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 GPX7Q96SL4 187 aaPredicted RBP12.91□□□□□ -0.34
SDF2-201ENST00000247020 CDCA4Q9BXL8 241 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 CDCP1Q9H5V8 836 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 FKRPQ9H9S5 495 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 MCCC2Q9HCC0 563 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 CMC2Q9NRP2 79 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 ZNF229Q9UJW7 825 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 CHCHD2Q9Y6H1 151 aaPredicted RBP12.91□□□□□ -0.34
SDF2-201ENST00000247020 CEPT1Q9Y6K0 416 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 PCNX3Q9H6A9 2034 aa12.91□□□□□ -0.34
SDF2-201ENST00000247020 TRAV36DV7A0A075B6V5 113 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 TRAV27A0A087WT01 109 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 LOC101059948A0A1B0GTJ6 334 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 ZNF99A8MXY4 864 aaPredicted RBP12.9□□□□□ -0.34
SDF2-201ENST00000247020 CDK2AP1O14519 115 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 SLC25A12O75746 678 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 MT-ATP6P00846 226 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 TSPAN19P0C672 248 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 DBTP11182 482 aaKnown RBP12.9□□□□□ -0.34
SDF2-201ENST00000247020 RBMS1P29558 406 aaKnown RBP12.9□□□□□ -0.34
SDF2-201ENST00000247020 NUDT6P53370 316 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 ST3GAL4Q11206 333 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 TMED1Q13445 227 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 TOMM34Q15785 309 aaPredicted RBP12.9□□□□□ -0.34
SDF2-201ENST00000247020 KLHL22Q53GT1 634 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 SYT6Q5T7P8 510 aaPredicted RBP12.9□□□□□ -0.34
SDF2-201ENST00000247020 UBE2UQ5VVX9 321 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 GID4Q8IVV7 300 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 ALDH16A1Q8IZ83 802 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 ANKK1Q8NFD2 765 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 ADAMTS17Q8TE56 1095 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 PAQR8Q8TEZ7 354 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 FAR1Q8WVX9 515 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 RORBQ92753 470 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 NTNG2Q96CW9 530 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 CRELD1Q96HD1 420 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 SGCZQ96LD1 299 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 ZNF582Q96NG8 517 aaPredicted RBP12.9□□□□□ -0.34
SDF2-201ENST00000247020 TNFRSF13CQ96RJ3 184 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 IFT27Q9BW83 186 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 SH2D2AQ9NP31 389 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 ACOT13Q9NPJ3 140 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 NANSQ9NR45 359 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 GPR83Q9NYM4 423 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 DNAJC27Q9NZQ0 273 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 HIF3AQ9Y2N7 669 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 SLC6A5Q9Y345 797 aa12.9□□□□□ -0.34
SDF2-201ENST00000247020 TMED7-TICAM2A0A0A6YYA0 188 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 ANKRD33BA6NCL7 494 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 A8MVM7 634 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 GNB5O14775 395 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 IDH3BO43837 385 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 NPIPB7O75200 414 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 CH25HO95992 272 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 ASAH2BP0C7U1 165 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 PEPDP12955 493 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 APEHP13798 732 aaKnown RBP12.9□□□□□ -0.35
SDF2-201ENST00000247020 PRKCAP17252 672 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 F8A1P23610 371 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 FOXK2Q01167 660 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 ZNF91Q05481 1191 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 PIGFQ07326 219 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 RAB40BQ12829 278 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 IRF3Q14653 427 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 ARMC4Q5T2S8 1044 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 AADACL4Q5VUY2 407 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 THSD4Q6ZMP0 1018 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 DPY19L2P2Q6ZN68 376 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 DTX1Q86Y01 620 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 TMEM156Q8N614 296 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 OR51A7Q8NH64 312 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 ADAMTS14Q8WXS8 1223 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 NKD1Q969G9 470 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 TMIGD2Q96BF3 282 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 MRGPRX4Q96LA9 322 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 RHNO1Q9BSD3 238 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 GALNT9Q9HCQ5 603 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 AMBNQ9NP70 447 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 KLHL21Q9UJP4 597 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 TMED7Q9Y3B3 224 aa12.9□□□□□ -0.35
SDF2-201ENST00000247020 SPEGQ15772 3267 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 PCSK5Q92824 1860 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 ARPC3O15145 178 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 ZNF208O43345 1280 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 OR2T1O43869 369 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 IFNGP01579 166 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 HK1P19367 917 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 FKBP2P26885 142 aaKnown RBP12.89□□□□□ -0.35
SDF2-201ENST00000247020 DCKP27707 260 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 ADH6P28332 368 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 MASP1P48740 699 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 ZNF41P51814 821 aaPredicted RBP12.89□□□□□ -0.35
SDF2-201ENST00000247020 Q0VFX4 171 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 IL10RAQ13651 578 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 ADGRG3Q86Y34 549 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 FADS6Q8N9I5 356 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 ZNF524Q96C55 264 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 TMEM80Q96HE8 168 aa12.89□□□□□ -0.35
SDF2-201ENST00000247020 KLHDC3Q9BQ90 382 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms