RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GABREP78334 506 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF91Q05481 1191 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 CHAF1BQ13112 559 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF74Q16587 644 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 H3F3CQ6NXT2 135 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 IL20RBQ6UXL0 311 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 GRINAQ7Z429 371 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 ADGRG3Q86Y34 549 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 KTI12Q96EK9 354 aaPredicted RBP13.83□□□□□ -0.2
HDHD3-201ENST00000238379 IFT27Q9BW83 186 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 SDHAF3Q9NRP4 125 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 MED11Q9P086 117 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF337Q9Y3M9 751 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 RPL36Q9Y3U8 105 aaKnown RBP13.83□□□□□ -0.2
HDHD3-201ENST00000238379 WIF1Q9Y5W5 379 aa13.83□□□□□ -0.2
HDHD3-201ENST00000238379 KDM4EB2RXH2 506 aaPredicted RBP13.82□□□□□ -0.2
HDHD3-201ENST00000238379 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.82□□□□□ -0.2
HDHD3-201ENST00000238379 PROB1E7EW31 1015 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 FADS2O95864 444 aaKnown RBP13.82□□□□□ -0.2
HDHD3-201ENST00000238379 SERPINA7P05543 415 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 ADRA2AP08913 450 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 PRKCAP17252 672 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 CCNA2P20248 432 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 ACVR2AP27037 513 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 SLC6A6P31641 620 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 GP2P55259 537 aaKnown RBP13.82□□□□□ -0.2
HDHD3-201ENST00000238379 RPS4XP62701 263 aaKnown RBP13.82□□□□□ -0.2
HDHD3-201ENST00000238379 FOXK2Q01167 660 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 LTBQ06643 244 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 TUBA3CQ13748 450 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 AADACL4Q5VUY2 407 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 CYP4Z2PQ8N1L4 340 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 STX19Q8N4C7 294 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 ANKK1Q8NFD2 765 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 ASB15Q8WXK1 588 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 ST8SIA1Q92185 356 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 NKD1Q969G9 470 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 PLEKHA8Q96JA3 519 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 MOGAT1Q96PD6 335 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 CPNE5Q9HCH3 593 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 PCDHGB6Q9Y5F9 930 aa13.82□□□□□ -0.2
HDHD3-201ENST00000238379 MRPS18BQ9Y676 258 aaKnown RBP13.82□□□□□ -0.2
HDHD3-201ENST00000238379 MPDZO75970 2070 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 TMED7-TICAM2A0A0A6YYA0 188 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 CCDC160A6NGH7 325 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF99A8MXY4 864 aaPredicted RBP13.81□□□□□ -0.2
HDHD3-201ENST00000238379 PRODHO43272 600 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 NDUFB2O95178 105 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 MSX1P28360 303 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 DLX5P56178 289 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 SNTA1Q13424 505 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 IRF3Q14653 427 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 CNPY1Q3B7I2 92 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 ZNF362Q5T0B9 420 aaPredicted RBP13.81□□□□□ -0.2
HDHD3-201ENST00000238379 TMEM81Q6P7N7 255 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 POMZP3Q6PJE2 187 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 CCDC81Q6ZN84 652 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 ADAMTS17Q8TE56 1095 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 TMEM234Q8WY98 164 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 RORBQ92753 470 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 TAAR8Q969N4 342 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 FRMD6Q96NE9 622 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 SECISBP2Q96T21 854 aaKnown RBP13.81□□□□□ -0.2
HDHD3-201ENST00000238379 CDCA4Q9BXL8 241 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 CMC2Q9NRP2 79 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 RYDENQ9NUL5 291 aaKnown RBP13.81□□□□□ -0.2
HDHD3-201ENST00000238379 PPP4R1LQ9P1A2 415 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 IL17BQ9UHF5 180 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 BAIAP2Q9UQB8 552 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 TMED7Q9Y3B3 224 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 DMXL1Q9Y485 3027 aa13.81□□□□□ -0.2
HDHD3-201ENST00000238379 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 ZC3H12DA2A288 527 aaKnown RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 CDRT15L2A8MXV6 281 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 ETV2O00321 342 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 NPIPB7O75200 414 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 PPP1R3DO95685 299 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 PEPDP12955 493 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 CEACAM1P13688 526 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 HTR3AP46098 478 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 INPP5JQ15735 1006 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 TBCEQ15813 527 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 SLC35F1Q5T1Q4 408 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 SYT6Q5T7P8 510 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 C1QL3Q5VWW1 255 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 ARSKQ6UWY0 536 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 ASCL5Q7RTU5 278 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 DTX1Q86Y01 620 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 CLVS1Q8IUQ0 354 aaPredicted RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 DND1Q8IYX4 353 aaKnown RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 NTNG2Q96CW9 530 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 NPAS1Q99742 590 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 FN3KQ9H479 309 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 SH2D2AQ9NP31 389 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 HINT3Q9NQE9 182 aaKnown RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 MRPS18AQ9NVS2 196 aaKnown RBP13.8□□□□□ -0.2
HDHD3-201ENST00000238379 TMEM72A0PK05 275 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 MCIDASD6RGH6 385 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 SUSD5O60279 629 aa13.8□□□□□ -0.2
HDHD3-201ENST00000238379 ASAH2BP0C7U1 165 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms