RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 PAGE3Q5JUK9 113 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 BLOC1S3Q6QNY0 202 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 UBE2J2Q8N2K1 259 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 PIGXQ8TBF5 258 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 PIGTQ969N2 578 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 RAD21L1Q9H4I0 556 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 SLC25A37Q9NYZ2 338 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 IGKV3D-15A0A087WSY6 115 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 C5orf58C9J3I9 102 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 ZNF208O43345 1280 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 FRS3O43559 492 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 H2AFXP16104 143 aaPredicted RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 IGHV1-2P23083 117 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 HOXC12P31275 282 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 ACAA2P42765 397 aaKnown RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 RIPPLY3P57055 190 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 BNIP2Q12982 314 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 ZNF311Q5JNZ3 666 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 C20orf204Q6ZNR8 217 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 ATG4DQ86TL0 474 aaPredicted RBP12.59□□□□□ -0.39
GPN3-201ENST00000228827 KRTAP1-3Q8IUG1 177 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 P3H2Q8IVL5 708 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 CKAP2Q8WWK9 683 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 HSD17B8Q92506 261 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 PERPQ96FX8 193 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 SPATA9Q9BWV2 254 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 ADAM19Q9H013 955 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 VIPAS39Q9H9C1 493 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 A4GALTQ9NPC4 353 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 ZNF232Q9UNY5 417 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 TRAPPC4Q9Y296 219 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 CHST2Q9Y4C5 530 aa12.59□□□□□ -0.39
GPN3-201ENST00000228827 CLOCKO15516 846 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 THBS1P07996 1170 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 ADSLP30566 484 aaPredicted RBP12.58□□□□□ -0.4
GPN3-201ENST00000228827 NTF4P34130 210 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 IDUAP35475 653 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 COPZ1P61923 177 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 SLC35A1P78382 337 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 HOXC5Q00444 222 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 FADDQ13158 208 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 SQLEQ14534 574 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 PDK3Q15120 406 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 Q5PR19 223 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 LRIF1Q5T3J3 769 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 GCNT6Q5T4J0 391 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 RNF220Q5VTB9 566 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 WBP2NLQ6ICG8 309 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 SERPINA11Q86U17 422 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 C10orf111Q8N326 155 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 NFKBIDQ8NI38 313 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 BBS10Q8TAM1 723 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 AKAP1Q92667 903 aaKnown RBP eCLIP12.58□□□□□ -0.4
GPN3-201ENST00000228827 APH1AQ96BI3 265 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 MAGEB18Q96M61 343 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 PIP5K1AQ99755 562 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 NAA11Q9BSU3 229 aaPredicted RBP12.58□□□□□ -0.4
GPN3-201ENST00000228827 POTEKPQ9BYX7 375 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 ARMC7Q9H6L4 198 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 SLC52A3Q9NQ40 469 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 IFT52Q9Y366 437 aa12.58□□□□□ -0.4
GPN3-201ENST00000228827 MPDZO75970 2070 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 DNPH1O43598 174 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 EIF1BO60739 113 aaKnown RBP12.57□□□□□ -0.4
GPN3-201ENST00000228827 MRPL33O75394 65 aaKnown RBP12.57□□□□□ -0.4
GPN3-201ENST00000228827 SASH3O75995 380 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 ATP4BP51164 291 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 CEACAM7Q14002 265 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 OR7A5Q15622 319 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 CASP12Q6UXS9 341 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 TMEM204Q9BSN7 226 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 GSX1Q9H4S2 264 aaPredicted RBP12.57□□□□□ -0.4
GPN3-201ENST00000228827 DLL4Q9NR61 685 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 VAPAQ9P0L0 249 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.57□□□□□ -0.4
GPN3-201ENST00000228827 DCTN4Q9UJW0 460 aa12.57□□□□□ -0.4
GPN3-201ENST00000228827 PRRC2AP48634 2157 aaKnown RBP12.57□□□□□ -0.4
GPN3-201ENST00000228827 CCT8L1PA6NM43 557 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 GPR171O14626 319 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 HS3ST1O14792 307 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 ARHGEF9O43307 516 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 RAD51DO75771 328 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 AKR7A3O95154 331 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 PGM3O95394 542 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 CD3EP07766 207 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 ARAFP10398 606 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 BMP2P12643 396 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 GGT1P19440 569 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 COX5AP20674 150 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 H3F3AP84243 136 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 PPA1Q15181 289 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 NCMAPQ5T1S8 102 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 OTUD3Q5T2D3 398 aaPredicted RBP12.56□□□□□ -0.4
GPN3-201ENST00000228827 SHEQ5VZ18 495 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 FBXW9Q5XUX1 488 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 ZNF433Q8N7K0 673 aaPredicted RBP12.56□□□□□ -0.4
GPN3-201ENST00000228827 TMEM99Q8N816 258 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 NEUROG1Q92886 237 aa12.56□□□□□ -0.4
GPN3-201ENST00000228827 ESRP2Q9H6T0 727 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms