RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 OR2T1O43869 369 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 THBS1P07996 1170 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR8G3PP0DMU2 310 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 PRKCAP17252 672 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 GABRB1P18505 474 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 CCKBRP32239 447 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 TRHRP34981 398 aaPredicted RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR1D4P47884 311 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 EVX1P49640 407 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 GZMKP49863 264 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 VASPP50552 380 aaPredicted RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 ACTA2P62736 377 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 ACTG2P63267 376 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 MRM1Q6IN84 353 aaKnown RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 TMEM184AQ6ZMB5 413 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 DPY19L4Q7Z388 723 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 NOXA1Q86UR1 476 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 ATCAYQ86WG3 371 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR5W2Q8NH69 310 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 C15orf40Q8WUR7 153 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 NXPE2Q96DL1 559 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 HYLS1Q96M11 299 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 ARHGAP9Q9BRR9 750 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 ZNF717Q9BY31 904 aaPredicted RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 CHIAQ9BZP6 476 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 UBQLN4Q9NRR5 601 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 COPZ2Q9P299 210 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 GPR55Q9Y2T6 319 aaPredicted RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 A0A0G2JMP0 313 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 A0A0X1KG70 313 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 TMEM72A0PK05 275 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 CDC42EP2O14613 210 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 MAGEB4O15481 346 aaPredicted RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SLC19A2O60779 497 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 KHDRBS3O75525 346 aaKnown RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 RBBP9O75884 186 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 F13BP05160 661 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 GP1BBP13224 206 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 MAPK3P27361 379 aaPredicted RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 AQP2P41181 271 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 MAP3K8P41279 467 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 PITPNAQ00169 270 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 PLCXD2Q0VAA5 305 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 RASGRP3Q8IV61 690 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SLITRK4Q8IW52 837 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SERPINA12Q8IW75 414 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 BBS1Q8NFJ9 593 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 BEST4Q8NFU0 473 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR4M2Q8NGB6 313 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 TMEM106AQ96A25 262 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 ZNF681Q96N22 645 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 CMKLR1Q99788 373 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 ZNF559Q9BR84 538 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 ELL3Q9HB65 397 aaPredicted RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 FGF20Q9NP95 211 aaPredicted RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 OR5K3A6NET4 321 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 TRIM64BA6NI03 449 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 CHP2O43745 196 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SNRNP200O75643 2136 aaKnown RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 IFNA6P05013 189 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SNRPBP14678 240 aaKnown RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SOX18P35713 384 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 RPS5P46782 204 aaKnown RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 NR0B1P51843 470 aaKnown RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SF3B4Q15427 424 aaKnown RBP eCLIP5.22□□□□□ -1.572e-7■□□□□ 10.7
SYNCRIP-204ENST00000616122 TRAM1Q15629 374 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 GXYLT1Q4G148 440 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 LRFN4Q6PJG9 635 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 TRMT10AQ8TBZ6 339 aaKnown RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 THAP3Q8WTV1 239 aaPredicted RBP5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 FBLIM1Q8WUP2 373 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 PMM1Q92871 262 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 NRSN2Q9GZP1 204 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SYT4Q9H2B2 425 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SLC25A19Q9HC21 320 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 SLC6A20Q9NP91 592 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 LAMP5Q9UJQ1 280 aa5.22□□□□□ -1.57
SYNCRIP-204ENST00000616122 PRAMEF27A3QJZ7 478 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 CDC14CA4D256 554 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 SPINT1O43278 529 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 PRKNO60260 465 aaPredicted RBP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 SEMA7AO75326 666 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 MLLT3P42568 568 aaPredicted RBP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 PITPNBP48739 271 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 ARFIP1P53367 373 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 CLDN12P56749 244 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 KIAA1024LP59773 190 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 POU4F2Q12837 409 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 SF3A2Q15428 464 aaKnown RBP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 TPRA1Q86W33 373 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 TMEM99Q8N816 258 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 ABHD4Q8TB40 342 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 ZFPM2Q8WW38 1151 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 THAP4Q8WY91 577 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 SMPDL3BQ92485 455 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 SNAPC3Q92966 411 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 ZDHHC12Q96GR4 267 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 IRF2BPLQ9H1B7 796 aa5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 C8orf33Q9H7E9 229 aaPredicted RBP5.21□□□□□ -1.57
SYNCRIP-204ENST00000616122 DHCR7Q9UBM7 475 aaKnown RBP5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms