RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 GRAMD2AQ8IUY3 354 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CMIPQ8IY22 773 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 SLC35F3Q8IY50 421 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 ZNF595Q8IYB9 648 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 NLGN4XQ8N0W4 816 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 COX18Q8N8Q8 333 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 POGLUT1Q8NBL1 392 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 SLC16A11Q8NCK7 471 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 PSD4Q8NDX1 1056 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 OR2T33Q8NG76 320 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 OR52L1Q8NGH7 329 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 OR52N1Q8NH53 320 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 SETD6Q8TBK2 473 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 ADAMTS14Q8WXS8 1223 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 SLC9A6Q92581 669 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 UFD1Q92890 307 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CDS1Q92903 461 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CTHRC1Q96CG8 243 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 RNFT2Q96EX2 444 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CEP19Q96LK0 163 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 LRFN5Q96NI6 719 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 WDFY2Q96P53 400 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CDC6Q99741 560 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 CCDC3Q9BQI4 270 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 PELOQ9BRX2 385 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 CENPOQ9BU64 300 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 TRIM2Q9C040 744 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 C6orf62Q9GZU0 229 aaPredicted RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 TMEM27Q9HBJ8 222 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 HHATLQ9HCP6 504 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 INPP5EQ9NRR6 644 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 RHBDL2Q9NX52 303 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 GFOD1Q9NXC2 390 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 EXOGQ9Y2C4 368 aaKnown RBP5.3□□□□□ -1.56
SDF2-206ENST00000587788 KCNE3Q9Y6H6 103 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 AKAP13Q12802 2813 aa5.3□□□□□ -1.56
SDF2-206ENST00000587788 UNC13CQ8NB66 2214 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 LOC105369274A0A096LPK9 316 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 TRAV20A0A0B4J274 112 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 LOC102723532A0A0G2JNH3 316 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 TRDV1A0A1B0GX56 115 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 SHISA3A0PJX4 238 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 CPED1A4D0V7 1026 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 CDHR4A6H8M9 788 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 SYNDIG1LA6NDD5 238 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 H0YIG0 161 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 M0R129 80 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 CLDN4O14493 209 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 SURF4O15260 269 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 MAGEB3O15480 346 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 P2RX6O15547 441 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 AKAP8O43823 692 aaKnown RBP5.29□□□□□ -1.56
SDF2-206ENST00000587788 BRINP1O60477 761 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 FCMRO60667 390 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 TPST2O60704 377 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 HCN1O60741 890 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 CTNSO60931 367 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 GPX5O75715 221 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 NKX2-2O95096 273 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 IGLV1-40P01703 118 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 STATHP02808 62 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 HLA-DPB1P04440 258 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 EIF2S1P05198 315 aaKnown RBP5.29□□□□□ -1.56
SDF2-206ENST00000587788 HBQ1P09105 142 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 RNH1P13489 461 aaKnown RBP5.29□□□□□ -1.56
SDF2-206ENST00000587788 BMP7P18075 431 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 FSTP19883 344 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 DRD5P21918 477 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 PTBP1P26599 531 aaKnown RBP eCLIP5.29□□□□□ -1.56
SDF2-206ENST00000587788 GABRA5P31644 462 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 MAP3K8P41279 467 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 PDX1P52945 283 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 CDH11P55287 796 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 CTBP2P56545 445 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 OR1D5P58170 312 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 SHC2P98077 582 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 ACY1Q03154 408 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 TRA2AQ13595 282 aaKnown RBP eCLIP5.29□□□□□ -1.56
SDF2-206ENST00000587788 TRAM1Q15629 374 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 DUSP5Q16690 384 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 NKPD1Q17RQ9 610 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 PRICKLE4Q2TBC4 344 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 AADACL4Q5VUY2 407 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 GUSBP11Q6P575 273 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 POMZP3Q6PJE2 187 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 FAM111BQ6SJ93 734 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 ZNF836Q6ZNA1 936 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 ZNF620Q6ZNG0 422 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 TMPRSS11FQ6ZWK6 438 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 MED25Q71SY5 747 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 ZNF550Q7Z398 422 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 PRSS42Q7Z5A4 293 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 TRIM73Q86UV7 250 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 COMTD1Q86VU5 262 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 KIF18BQ86Y91 864 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 LYSMD2Q8IV50 215 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 SPACA3Q8IXA5 215 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 PHC2Q8IXK0 858 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 ZNF440Q8IYI8 595 aa5.29□□□□□ -1.56
SDF2-206ENST00000587788 GPR135Q8IZ08 494 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms