RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 ARHGAP11BQ3KRB8 267 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 TNFAIP8L2Q6P589 184 aaPredicted RBP13.65□□□□□ -0.22
NME3-211ENST00000568561 EIF3MQ7L2H7 374 aaKnown RBP13.65□□□□□ -0.22
NME3-211ENST00000568561 MTDHQ86UE4 582 aaKnown RBP13.65□□□□□ -0.22
NME3-211ENST00000568561 P2RY8Q86VZ1 359 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 ANKRD46Q86W74 232 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 CCDC103Q8IW40 242 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 MUC15Q8N387 334 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 OR10H5Q8NGA6 315 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 OR52E4Q8NGH9 312 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 SLC25A43Q8WUT9 341 aaPredicted RBP13.65□□□□□ -0.22
NME3-211ENST00000568561 TMEM234Q8WY98 164 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 PPP1R36Q96LQ0 422 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 DHRS9Q9BPW9 319 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 CBLN4Q9NTU7 201 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 CLDN24A6NM45 220 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 LY6HO94772 140 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 C1QCP02747 245 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 ITGA5P08648 1049 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 DHRS4L1P0CG22 281 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 OR12D1P0DN82 309 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 ZNF16P17020 682 aaPredicted RBP13.64□□□□□ -0.23
NME3-211ENST00000568561 PGM1P36871 562 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 FABP6P51161 128 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 SLC25A3Q00325 362 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 FUT5Q11128 374 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 TYW3Q6IPR3 259 aaKnown RBP13.64□□□□□ -0.23
NME3-211ENST00000568561 BHLHB9Q6PI77 547 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 FBXL14Q8N1E6 418 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 NATD1Q8N6N6 113 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 FAM71CQ8NEG0 241 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 OR4A15Q8NGL6 344 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 ZNF563Q8TA94 476 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 TCP10LQ8TDR4 215 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 ZHX1-C8orf76Q96EF9 292 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 TNFRSF13CQ96RJ3 184 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 CCDC106Q9BWC9 280 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 ASB6Q9NWX5 421 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 CHRNA9Q9UGM1 479 aa13.64□□□□□ -0.23
NME3-211ENST00000568561 DUXAA6NLW8 204 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 AK1P00568 194 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 CREB1P16220 341 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 PTAFRP25105 342 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 OR2B6P58173 313 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 RAB35Q15286 201 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 PDCD2Q16342 344 aaPredicted RBP13.63□□□□□ -0.23
NME3-211ENST00000568561 GABRA6Q16445 453 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 EMBQ6PCB8 327 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 KLHL17Q6TDP4 642 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 CASP12Q6UXS9 341 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 PIGXQ8TBF5 258 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 XAGE5Q8WWM1 108 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 TMEM158Q8WZ71 300 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 ZG16BQ96DA0 208 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 RADILQ96JH8 1075 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 EXD2Q9NVH0 621 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 TAS2R16Q9NYV7 291 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 MALT1Q9UDY8 824 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 MGAT4BQ9UQ53 548 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 WDR45Q9Y484 360 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 SPIN1Q9Y657 262 aaPredicted RBP13.63□□□□□ -0.23
NME3-211ENST00000568561 ATP23Q9Y6H3 246 aa13.63□□□□□ -0.23
NME3-211ENST00000568561 AP3D1O14617 1153 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 MRPL33O75394 65 aaKnown RBP13.62□□□□□ -0.23
NME3-211ENST00000568561 CPSF4O95639 269 aaKnown RBP13.62□□□□□ -0.23
NME3-211ENST00000568561 PMS2P2O95744 297 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 FAM157CP0CG43 387 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 APOBEC1P41238 236 aaKnown RBP13.62□□□□□ -0.23
NME3-211ENST00000568561 CLDN8P56748 225 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 SRSF2Q01130 221 aaKnown RBP13.62□□□□□ -0.23
NME3-211ENST00000568561 PDK3Q15120 406 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 FRRS1Q6ZNA5 592 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 SSX8Q7RTT4 187 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 GRINAQ7Z429 371 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 ADGRG3Q86Y34 549 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 ARIH2OSQ8N7S6 290 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 WDR31Q8NA23 367 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 FAM168AQ92567 244 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 ROPN1LQ96C74 230 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 PKNOX2Q96KN3 472 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 KCNK17Q96T54 332 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 INPP5KQ9BT40 448 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 NOP53Q9NZM5 478 aaKnown RBP13.62□□□□□ -0.23
NME3-211ENST00000568561 ANK2Q01484 3957 aa13.62□□□□□ -0.23
NME3-211ENST00000568561 PRAMEF27A3QJZ7 478 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 ELOA3DA6NLF2 546 aaPredicted RBP13.61□□□□□ -0.23
NME3-211ENST00000568561 ATP6V1G2-DDX39BF2Z307 99 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 GPR171O14626 319 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 IDH2P48735 452 aaKnown RBP13.61□□□□□ -0.23
NME3-211ENST00000568561 SLC16A1P53985 500 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 PHC1P78364 1004 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 VLDLRP98155 873 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 EMX2Q04743 252 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 LOXL1Q08397 574 aaPredicted RBP13.61□□□□□ -0.23
NME3-211ENST00000568561 ELOA3BQ3SY89 546 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 ATAD3BQ5T9A4 648 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 ELOA3Q8NG57 546 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 C10orf105Q8TEF2 133 aa13.61□□□□□ -0.23
NME3-211ENST00000568561 CNOT9Q92600 299 aaKnown RBP13.61□□□□□ -0.23
NME3-211ENST00000568561 SLC7A10Q9NS82 523 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms