RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 FAM90A27PA6NNH2 459 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 CLOCKO15516 846 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 TIPRLO75663 272 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 IFNW1P05000 195 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 PABPC4LP0CB38 370 aaKnown RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 ZNF708P17019 499 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 ZNF17P17021 662 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 TCEA1P23193 301 aaKnown RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 ADH7P40394 386 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 KCNJ5P48544 419 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 STARP49675 285 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 SESN3P58005 492 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 B3GALT5-AS1P59052 145 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 RPS3AP61247 264 aaKnown RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 EEF1A1P68104 462 aaKnown RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 KCNJ10P78508 379 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 LIN52Q52LA3 116 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 KLHL26Q53HC5 615 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 RPS26P11Q5JNZ5 115 aaPredicted RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 EEF1A1P5Q5VTE0 462 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 TYW3Q6IPR3 259 aaKnown RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 DHRS4L2Q6PKH6 230 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 FRRS1Q6ZNA5 592 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 ZDHHC21Q8IVQ6 265 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 GATSQ8NAP1 163 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 MBD3L2Q8NHZ7 208 aaPredicted RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 SLC35B4Q969S0 331 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 UCN2Q96RP3 112 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 PKP2Q99959 881 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 SPOCK3Q9BQ16 436 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 TUBA1CQ9BQE3 449 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 FAM32AQ9Y421 112 aaKnown RBP12.12□□□□□ -0.47
CLK3-218ENST00000566926 AP4B1Q9Y6B7 739 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 KCNE3Q9Y6H6 103 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 V9GYQ6 96 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 MPDZO75970 2070 aa12.12□□□□□ -0.47
CLK3-218ENST00000566926 C17orf51A8MQB3 221 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 B4DXG7 233 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 ADAMDEC1O15204 470 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 HCRTR2O43614 444 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 TPST1O60507 370 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 EIF4E2O60573 245 aaKnown RBP12.11□□□□□ -0.47
CLK3-218ENST00000566926 TOXO94900 526 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 PRSS23O95084 383 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 FESP07332 822 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 CD247P20963 164 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 RPS4Y1P22090 263 aaKnown RBP12.11□□□□□ -0.47
CLK3-218ENST00000566926 CTSSP25774 331 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 EIF1P41567 113 aaKnown RBP12.11□□□□□ -0.47
CLK3-218ENST00000566926 P2RX1P51575 399 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 ARHGDIAP52565 204 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 SUMO3P55854 103 aaPredicted RBP12.11□□□□□ -0.47
CLK3-218ENST00000566926 CLDN18P56856 261 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 CHRNEQ04844 493 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 GPR68Q15743 365 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 ZNF311Q5JNZ3 666 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 OGFRL1Q5TC84 451 aaPredicted RBP12.11□□□□□ -0.47
CLK3-218ENST00000566926 RNF220Q5VTB9 566 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 SEM1Q6ZVN7 128 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 ADGRE4PQ86SQ3 457 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 CYP4Z1Q86W10 505 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 CMIPQ8IY22 773 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 LILRA2Q8N149 483 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 SVOPLQ8N434 492 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 PACRGLQ8N7B6 248 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 FAM86B1Q8N7N1 296 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 ZNF614Q8N883 585 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 OR52P1PQ8NH57 321 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 LRTOMTQ8WZ04 291 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 WNT2BQ93097 391 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 EME1Q96AY2 570 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 SH3YL1Q96HL8 342 aaPredicted RBP12.11□□□□□ -0.47
CLK3-218ENST00000566926 C9orf16Q9BUW7 83 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 UCK2Q9BZX2 261 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 ENKD1Q9H0I2 346 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 VDAC3Q9Y277 283 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 ZNF337Q9Y3M9 751 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 NOTCH2Q04721 2471 aa12.11□□□□□ -0.47
CLK3-218ENST00000566926 CELSR2Q9HCU4 2923 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 C7orf72A4D263 438 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 CLCA1A8K7I4 914 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 NPIPB9F8W1W9 429 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 H0YJX3 145 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 H3BML4 177 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 GNGT2O14610 69 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 GMFGO60234 142 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 NUDT14O95848 222 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 LGI1O95970 557 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 IL18BPO95998 194 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 CST1P01037 141 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 OPN1SWP03999 348 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 IL7RP16871 459 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 RHCEP18577 417 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 IFNA8P32881 189 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 OPRM1P35372 400 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 PEX19P40855 299 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 SMIM11AP58511 58 aa12.1□□□□□ -0.47
CLK3-218ENST00000566926 ZNF141Q15928 474 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms