RNA–Protein interactions for RNA: ENST00000564480.1

KNOP1-202, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 2

Gene KNOP1, Length 1,020 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-202ENST00000564480 ADGRG3Q86Y34 549 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 DDIASQ8IXT1 998 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 TWIST2Q8WVJ9 160 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 C3orf49Q96BT1 292 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 ZG16BQ96DA0 208 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 C1orf159Q96HA4 380 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 C16orf45Q96MC5 204 aaPredicted RBP12.04□□□□□ -0.48
KNOP1-202ENST00000564480 C1orf50Q9BV19 199 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 NMUR2Q9GZQ4 415 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 SERINC1Q9NRX5 453 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 SLC7A10Q9NS82 523 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 EMC3Q9P0I2 261 aa12.04□□□□□ -0.48
KNOP1-202ENST00000564480 NUP214P35658 2090 aaPredicted RBP12.04□□□□□ -0.48
KNOP1-202ENST00000564480 FGF4P08620 206 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 APOBEC3AP31941 199 aaPredicted RBP12.03□□□□□ -0.48
KNOP1-202ENST00000564480 PGM1P36871 562 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 GZMKP49863 264 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 SLC16A1P53985 500 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 CSNK2A1P68400 391 aaPredicted RBP12.03□□□□□ -0.48
KNOP1-202ENST00000564480 H3F3AP84243 136 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 XKR7Q5GH72 579 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 TSPO2Q5TGU0 170 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 FAM166AQ6J272 317 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 RIMKLAQ8IXN7 391 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 CLECL1Q8IZS7 167 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 CCDC63Q8NA47 563 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 FAM71CQ8NEG0 241 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 SFXN5Q8TD22 340 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 FBXO17Q96EF6 278 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 SLC17A5Q9NRA2 495 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 KCNS2Q9ULS6 477 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 MOKQ9UQ07 419 aa12.03□□□□□ -0.48
KNOP1-202ENST00000564480 ARFGEF3Q5TH69 2177 aa12.02□□□□□ -0.48
KNOP1-202ENST00000564480 CLDN24A6NM45 220 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 MRPL33O75394 65 aaKnown RBP12.02□□□□□ -0.49
KNOP1-202ENST00000564480 PMS2P2O95744 297 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 C1QCP02747 245 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 KRT16P08779 473 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 CCNA2P20248 432 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 RYKP34925 604 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 CCT5P48643 541 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 PHC1P78364 1004 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 CHRNB3Q05901 458 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 ARHGAP11BQ3KRB8 267 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 C6orf136Q5SQH8 315 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 IL23RQ5VWK5 629 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 OR7E24Q6IFN5 339 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 C6orf120Q7Z4R8 191 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 GSPT2Q8IYD1 628 aaKnown RBP12.02□□□□□ -0.49
KNOP1-202ENST00000564480 C4orf33Q8N1A6 199 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 DEPDC4Q8N2C3 294 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 ANKS4BQ8N8V4 417 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 AGR3Q8TD06 166 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 SLC25A43Q8WUT9 341 aaPredicted RBP12.02□□□□□ -0.49
KNOP1-202ENST00000564480 TMEM234Q8WY98 164 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 ZNF350Q9GZX5 532 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 CHRNA9Q9UGM1 479 aa12.02□□□□□ -0.49
KNOP1-202ENST00000564480 PRAMEF27A3QJZ7 478 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 TMEM114B3SHH9 223 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 GPR171O14626 319 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 KLF11O14901 512 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 CFLARO15519 480 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 TRIM13O60858 407 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 STX11O75558 287 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 SLU7O95391 586 aaKnown RBP12.01□□□□□ -0.49
KNOP1-202ENST00000564480 CHEK2O96017 543 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 CSF3P09919 207 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 IMPDH2P12268 514 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 DDX5P17844 614 aaKnown RBP12.01□□□□□ -0.49
KNOP1-202ENST00000564480 PGCP20142 388 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 MATN1P21941 496 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 ALDH3A1P30838 453 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 SOAT1P35610 550 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 APOBEC1P41238 236 aaKnown RBP12.01□□□□□ -0.49
KNOP1-202ENST00000564480 PDLIM4P50479 330 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 OR2B6P58173 313 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 FUT5Q11128 374 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 LSM12Q3MHD2 195 aaKnown RBP12.01□□□□□ -0.49
KNOP1-202ENST00000564480 AP1ARQ63HQ0 302 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 TYW3Q6IPR3 259 aaKnown RBP12.01□□□□□ -0.49
KNOP1-202ENST00000564480 EMBQ6PCB8 327 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 CASP12Q6UXS9 341 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 EIF3MQ7L2H7 374 aaKnown RBP12.01□□□□□ -0.49
KNOP1-202ENST00000564480 ZIC4Q8N9L1 334 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 PIGXQ8TBF5 258 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 RAB8BQ92930 207 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 ARL8AQ96BM9 186 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 PPP3R2Q96LZ3 170 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 TRMOQ9BU70 441 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 MECRQ9BV79 373 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 BHLHE41Q9C0J9 482 aaPredicted RBP12.01□□□□□ -0.49
KNOP1-202ENST00000564480 FKRPQ9H9S5 495 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 FLVCR1Q9Y5Y0 555 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 PMF1-BGLAPU3KQ54 211 aa12.01□□□□□ -0.49
KNOP1-202ENST00000564480 LRP5LA4QPB2 252 aa12□□□□□ -0.49
KNOP1-202ENST00000564480 SMIM23A6NLE4 172 aa12□□□□□ -0.49
KNOP1-202ENST00000564480 COPEO14579 308 aa12□□□□□ -0.49
KNOP1-202ENST00000564480 AP3D1O14617 1153 aa12□□□□□ -0.49
KNOP1-202ENST00000564480 TGFAP01135 160 aa12□□□□□ -0.49
KNOP1-202ENST00000564480 APEHP13798 732 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms