RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 ZNF716A6NP11 495 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 PGM3O95394 542 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 FGF4P08620 206 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 ITGA5P08648 1049 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 DHRS4L1P0CG22 281 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 CDH2P19022 906 aaPredicted RBP12.99□□□□□ -0.33
CHD8-211ENST00000556833 SLC25A3Q00325 362 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 ZNF141Q15928 474 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 DNAJC14Q6Y2X3 702 aaPredicted RBP12.99□□□□□ -0.33
CHD8-211ENST00000556833 EIF3MQ7L2H7 374 aaKnown RBP12.99□□□□□ -0.33
CHD8-211ENST00000556833 MTDHQ86UE4 582 aaKnown RBP12.99□□□□□ -0.33
CHD8-211ENST00000556833 RIMKLAQ8IXN7 391 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 TCP10LQ8TDR4 215 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 XAGE5Q8WWM1 108 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 TMEM234Q8WY98 164 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 TMEM158Q8WZ71 300 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 C3orf49Q96BT1 292 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 MOAP1Q96BY2 351 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 TNFRSF13CQ96RJ3 184 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 DHRS9Q9BPW9 319 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 USB1Q9BQ65 265 aaKnown RBP12.99□□□□□ -0.33
CHD8-211ENST00000556833 CHODLQ9H9P2 273 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 ACER3Q9NUN7 267 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 ASB6Q9NWX5 421 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 CHRNA9Q9UGM1 479 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 NBEAL1Q6ZS30 2694 aa12.99□□□□□ -0.33
CHD8-211ENST00000556833 ETV2O00321 342 aaPredicted RBP12.98□□□□□ -0.33
CHD8-211ENST00000556833 AP3D1O14617 1153 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 KIAA0513O60268 411 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 MRPL33O75394 65 aaKnown RBP12.98□□□□□ -0.33
CHD8-211ENST00000556833 CREB1P16220 341 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 PRPS1L1P21108 318 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 PGM1P36871 562 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 FUT5Q11128 374 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 CARTPTQ16568 116 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 ARHGAP11BQ3KRB8 267 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 KLHL17Q6TDP4 642 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 OR10H5Q8NGA6 315 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 FAM168AQ92567 244 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 ZBTB9Q96C00 473 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 ZG16BQ96DA0 208 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 ZHX1-C8orf76Q96EF9 292 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 PKNOX2Q96KN3 472 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 CCDC106Q9BWC9 280 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 BEX2Q9BXY8 128 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 ZNF350Q9GZX5 532 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 WDR45Q9Y484 360 aa12.98□□□□□ -0.33
CHD8-211ENST00000556833 WDR91A4D1P6 747 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 ATP6V1G2-DDX39BF2Z307 99 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 FAM157CP0CG43 387 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 PTAFRP25105 342 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 IDH2P48735 452 aaKnown RBP12.97□□□□□ -0.33
CHD8-211ENST00000556833 PLAURQ03405 335 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 GGTLC2Q14390 218 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 GABRA6Q16445 453 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 GPAT3Q53EU6 434 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 TYW3Q6IPR3 259 aaKnown RBP12.97□□□□□ -0.33
CHD8-211ENST00000556833 EMBQ6PCB8 327 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 BHLHB9Q6PI77 547 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 P2RY8Q86VZ1 359 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 PIGXQ8TBF5 258 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 SLC25A43Q8WUT9 341 aaPredicted RBP12.97□□□□□ -0.33
CHD8-211ENST00000556833 EXD2Q9NVH0 621 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 TAS2R16Q9NYV7 291 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 UPB1Q9UBR1 384 aa12.97□□□□□ -0.33
CHD8-211ENST00000556833 SVEP1Q4LDE5 3571 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 IGKV3D-15A0A087WSY6 115 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 TMEM72A0PK05 275 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 KLF11O14901 512 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 ITM2AO43736 263 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 AK1P00568 194 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 IGHV4-31P0DP07 118 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 NME5P56597 212 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 KRTAP24-1Q3LI83 254 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 ATAD3BQ5T9A4 648 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 FRRS1Q6ZNA5 592 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 ADGRG3Q86Y34 549 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 DEPDC4Q8N2C3 294 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 ARFGAP2Q8N6H7 521 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 WDR31Q8NA23 367 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 CNOT9Q92600 299 aaKnown RBP12.96□□□□□ -0.33
CHD8-211ENST00000556833 ROPN1LQ96C74 230 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 FBXO17Q96EF6 278 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 INPP5KQ9BT40 448 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 GRIP2Q9C0E4 1043 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 SLC7A10Q9NS82 523 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 MKS1Q9NXB0 559 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 NOP53Q9NZM5 478 aaKnown RBP12.96□□□□□ -0.33
CHD8-211ENST00000556833 CDC42EP3Q9UKI2 254 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 MGAT4BQ9UQ53 548 aa12.96□□□□□ -0.33
CHD8-211ENST00000556833 SPIN1Q9Y657 262 aaPredicted RBP12.96□□□□□ -0.33
CHD8-211ENST00000556833 TMED7-TICAM2A0A0A6YYA0 188 aa12.95□□□□□ -0.34
CHD8-211ENST00000556833 GOLGA8QA0A0J9YX86 632 aa12.95□□□□□ -0.34
CHD8-211ENST00000556833 ZC3H12DA2A288 527 aaKnown RBP12.95□□□□□ -0.34
CHD8-211ENST00000556833 GOLGA8OA6NCC3 632 aa12.95□□□□□ -0.34
CHD8-211ENST00000556833 DUXAA6NLW8 204 aa12.95□□□□□ -0.34
CHD8-211ENST00000556833 GOLGA8NF8WBI6 632 aa12.95□□□□□ -0.34
CHD8-211ENST00000556833 DNAJA2O60884 412 aa12.95□□□□□ -0.34
CHD8-211ENST00000556833 PMS2P2O95744 297 aa12.95□□□□□ -0.34
CHD8-211ENST00000556833 CHI3L1P36222 383 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms