RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 LAMP3Q9UQV4 416 aa9.32□□□□□ -0.92
DDX23-217ENST00000553065 TMEM120BA0PK00 339 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 TMEM72A0PK05 275 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 GJE1A6NN92 205 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 SHISA9B4DS77 424 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 E9PBE3 544 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 SULT2B1O00204 365 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 SMAD7O15105 426 aaKnown RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 ARHGEF9O43307 516 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 CNOT4O95628 575 aaKnown RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 IGHV3-9P01782 118 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 HEXAP06865 529 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 TFPTP0C1Z6 253 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 HOXB9P17482 250 aaPredicted RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 PGCP20142 388 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 CCNA2P20248 432 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 ADSLP30566 484 aaPredicted RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 APOBEC1P41238 236 aaKnown RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 BSPH1Q075Z2 132 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 P2RY6Q15077 328 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 PDK3Q15120 406 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 BEND6Q5SZJ8 279 aaPredicted RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 C3orf33Q6P1S2 294 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 LRRC74BQ6ZQY2 392 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 ZNF621Q6ZSS3 439 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 BHLHA15Q7RTS1 189 aaPredicted RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 C16orf62Q7Z3J2 963 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 SPATA19Q7Z5L4 167 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 STK32CQ86UX6 486 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 C10orf111Q8N326 155 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 TMCO5AQ8N6Q1 288 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 ANKRD42Q8N9B4 389 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 WDR31Q8NA23 367 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 KBTBD8Q8NFY9 601 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 PNPT1Q8TCS8 783 aaKnown RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 VPS33AQ96AX1 596 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 TRNT1Q96Q11 434 aaKnown RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 PAIP2Q9BPZ3 127 aaKnown RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 MTHFD2LQ9H903 347 aaPredicted RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 SLC52A3Q9NQ40 469 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 EXOSC3Q9NQT5 275 aaKnown RBP9.31□□□□□ -0.92
DDX23-217ENST00000553065 POLE3Q9NRF9 147 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 THAP1Q9NVV9 213 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 KLHL9Q9P2J3 617 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 PCDHGB4Q9UN71 923 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 SLC35A3Q9Y2D2 325 aa9.31□□□□□ -0.92
DDX23-217ENST00000553065 HDAC3O15379 428 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 SNUPNO95149 360 aaKnown RBP9.3□□□□□ -0.92
DDX23-217ENST00000553065 PMS2P2O95744 297 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 NUDT7P0C024 238 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 GKN3PP0CG01 181 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 KITP10721 976 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 PRG2P13727 222 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 PTNP21246 168 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 SLC7A1P30825 629 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 P2RY4P51582 365 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 SLC16A1P53985 500 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 CLNS1AP54105 237 aaKnown RBP9.3□□□□□ -0.92
DDX23-217ENST00000553065 SLC18A1P54219 525 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 TNK1Q13470 666 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 ZNF672Q499Z4 452 aaPredicted RBP9.3□□□□□ -0.92
DDX23-217ENST00000553065 GPAT3Q53EU6 434 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 GRINAQ7Z429 371 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 GALNT5Q7Z7M9 940 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 VRK2Q86Y07 508 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 FUNDC1Q8IVP5 155 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 CLIP4Q8N3C7 705 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 OR9I1Q8NGQ6 314 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 MGARPQ8TDB4 240 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 SMAP2Q8WU79 429 aaPredicted RBP9.3□□□□□ -0.92
DDX23-217ENST00000553065 OIT3Q8WWZ8 545 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 TMEM234Q8WY98 164 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 KISS1RQ969F8 398 aaPredicted RBP9.3□□□□□ -0.92
DDX23-217ENST00000553065 REXO5Q96IC2 774 aaKnown RBP9.3□□□□□ -0.92
DDX23-217ENST00000553065 MUS81Q96NY9 551 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 OR52E6Q96RD3 313 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 PANX1Q96RD7 426 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 TMBIM4Q9HC24 238 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.3□□□□□ -0.92
DDX23-217ENST00000553065 CHRNA9Q9UGM1 479 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 ADAM21Q9UKJ8 722 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 TRAPPC4Q9Y296 219 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 MAGED1Q9Y5V3 778 aaPredicted RBP9.3□□□□□ -0.92
DDX23-217ENST00000553065 DSPPQ9NZW4 1301 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 PLCE1Q9P212 2302 aa9.3□□□□□ -0.92
DDX23-217ENST00000553065 TMED7-TICAM2A0A0A6YYA0 188 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 A0A1W2PR80 420 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 KIAA1324LA8MWY0 1029 aaPredicted RBP9.29□□□□□ -0.92
DDX23-217ENST00000553065 E7EQL1 145 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 FAAHO00519 579 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 AGR2O95994 175 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 ITGA5P08648 1049 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 ETFAP13804 333 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 TACR3P29371 465 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 CHI3L1P36222 383 aaPredicted RBP9.29□□□□□ -0.92
DDX23-217ENST00000553065 CDKN1AP38936 164 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 MAGOHP61326 146 aaKnown RBP9.29□□□□□ -0.92
DDX23-217ENST00000553065 SLC25A3Q00325 362 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 EPS8Q12929 822 aa9.29□□□□□ -0.92
DDX23-217ENST00000553065 GABRA6Q16445 453 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms