RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 LOXL1Q08397 574 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-205ENST00000550013 PDK3Q15120 406 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 RAB35Q15286 201 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 ARHGAP11BQ3KRB8 267 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 ELOA3BQ3SY89 546 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 KLHL17Q6TDP4 642 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 EIF3MQ7L2H7 374 aaKnown RBP13.54□□□□□ -0.24
RAB5C-205ENST00000550013 CCDC103Q8IW40 242 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 ELOA3Q8NG57 546 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 SLC25A43Q8WUT9 341 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-205ENST00000550013 SLC35G5Q96KT7 338 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 CCDC106Q9BWC9 280 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 OR11A1Q9GZK7 315 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 ZNF350Q9GZX5 532 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 PPCSQ9HAB8 311 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 MKS1Q9NXB0 559 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 ZDHHC2Q9UIJ5 367 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 ANK2Q01484 3957 aa13.54□□□□□ -0.24
RAB5C-205ENST00000550013 DUXAA6NLW8 204 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 AK1P00568 194 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 ITGA5P08648 1049 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 SLC25A16P16260 332 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 ZNF16P17020 682 aaPredicted RBP13.53□□□□□ -0.24
RAB5C-205ENST00000550013 RYKP34925 604 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 PGM1P36871 562 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 GABRA6Q16445 453 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 C9orf135Q5VTT2 229 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 OR4F3Q6IEY1 312 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 BHLHB9Q6PI77 547 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 C16orf62Q7Z3J2 963 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 HMGN2P46Q86SG4 172 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 HOMEZQ8IX15 550 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 WDR31Q8NA23 367 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 FAM71CQ8NEG0 241 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 OR52E4Q8NGH9 312 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 PIGXQ8TBF5 258 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 C10orf105Q8TEF2 133 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 FAM168AQ92567 244 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 TUBGCP3Q96CW5 907 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 ZHX1-C8orf76Q96EF9 292 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 BEX2Q9BXY8 128 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 OR51I1Q9H343 314 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 ASB6Q9NWX5 421 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 TAS2R16Q9NYV7 291 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 MALT1Q9UDY8 824 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 CHRNA9Q9UGM1 479 aa13.53□□□□□ -0.24
RAB5C-205ENST00000550013 TLDC2A0PJX2 215 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 H7C417 338 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 KIAA0513O60268 411 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 SPAG7O75391 227 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 MRPL33O75394 65 aaKnown RBP13.52□□□□□ -0.25
RAB5C-205ENST00000550013 LY6HO94772 140 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 PMS2P2O95744 297 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 IGHV4-31P0DP07 118 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 CCNA2P20248 432 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 APOBEC1P41238 236 aaKnown RBP13.52□□□□□ -0.25
RAB5C-205ENST00000550013 SLC25A3Q00325 362 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 PLAURQ03405 335 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 FUT5Q11128 374 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 KRTAP24-1Q3LI83 254 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 TYW3Q6IPR3 259 aaKnown RBP13.52□□□□□ -0.25
RAB5C-205ENST00000550013 EMBQ6PCB8 327 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 DEPDC4Q8N2C3 294 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 ARIH2OSQ8N7S6 290 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 KIF18AQ8NI77 898 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 ZNF563Q8TA94 476 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 RAB8BQ92930 207 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 MUS81Q96NY9 551 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 INPP5KQ9BT40 448 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 SPIN1Q9Y657 262 aaPredicted RBP13.52□□□□□ -0.25
RAB5C-205ENST00000550013 ATP23Q9Y6H3 246 aa13.52□□□□□ -0.25
RAB5C-205ENST00000550013 PDLIM1O00151 329 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 GPR171O14626 319 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 OR12D1P0DN82 309 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 SLC16A1P53985 500 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 CLDN8P56748 225 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 OR2B6P58173 313 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 CYB5R2Q6BCY4 276 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 ZNF544Q6NX49 715 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 TNFAIP8L2Q6P589 184 aaPredicted RBP13.51□□□□□ -0.25
RAB5C-205ENST00000550013 CASP12Q6UXS9 341 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 ADGRG3Q86Y34 549 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 OR4A15Q8NGL6 344 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 XAGE5Q8WWM1 108 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 ZG16BQ96DA0 208 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 EXD2Q9NVH0 621 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 TMEM160Q9NX00 188 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 SLC35A3Q9Y2D2 325 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 HDGFL3Q9Y3E1 203 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 WDR45Q9Y484 360 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 SVEP1Q4LDE5 3571 aa13.51□□□□□ -0.25
RAB5C-205ENST00000550013 CLDN24A6NM45 220 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 AP3D1O14617 1153 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 ANKRD28O15084 1053 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 F12P00748 615 aaPredicted RBP13.5□□□□□ -0.25
RAB5C-205ENST00000550013 EFNA4P52798 201 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 SRSF2Q01130 221 aaKnown RBP13.5□□□□□ -0.25
RAB5C-205ENST00000550013 OR7E24Q6IFN5 339 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 FRRS1Q6ZNA5 592 aa13.5□□□□□ -0.25
RAB5C-205ENST00000550013 GRINAQ7Z429 371 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms