RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 ARHGAP11BQ3KRB8 267 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 C1QTNF12Q5T7M4 302 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 ATAD3BQ5T9A4 648 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 C6orf120Q7Z4R8 191 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 KRTCAP2Q8N6L1 136 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 KIF18AQ8NI77 898 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 ZNF563Q8TA94 476 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 AGR3Q8TD06 166 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 EPS8L3Q8TE67 593 aaKnown RBP11.95□□□□□ -0.5
TROAP-211ENST00000549891 APOPT1Q96IL0 206 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 INPP5KQ9BT40 448 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 AMBRA1Q9C0C7 1298 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 FKRPQ9H9S5 495 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 MKS1Q9NXB0 559 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 MALT1Q9UDY8 824 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 GIMAP2Q9UG22 337 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 CHRNA9Q9UGM1 479 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 PCDHGB4Q9UN71 923 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 HDGFL3Q9Y3E1 203 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 PMF1-BGLAPU3KQ54 211 aa11.95□□□□□ -0.5
TROAP-211ENST00000549891 ZNF716A6NP11 495 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 M0R1B8 84 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 FCMRO60667 390 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 MAGEA8P43361 318 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 SLC16A1P53985 500 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 RPS26P62854 115 aaKnown RBP11.94□□□□□ -0.5
TROAP-211ENST00000549891 PGS1Q32NB8 556 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 CYB5R2Q6BCY4 276 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 GRINAQ7Z429 371 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 RIMKLAQ8IXN7 391 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 GSPT2Q8IYD1 628 aaKnown RBP11.94□□□□□ -0.5
TROAP-211ENST00000549891 ZNF525Q8N782 197 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 PROX1Q92786 737 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 TUBGCP3Q96CW5 907 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 SLC35G5Q96KT7 338 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 MUS81Q96NY9 551 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 CCDC106Q9BWC9 280 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 ZNF350Q9GZX5 532 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 SHARPINQ9H0F6 387 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 POLE3Q9NRF9 147 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 PARPBPQ9NWS1 579 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 MKLN1Q9UL63 735 aa11.94□□□□□ -0.5
TROAP-211ENST00000549891 RNF103-CHMP3A0A140T963 221 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 KIAA0513O60268 411 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 SKAP2O75563 359 aaPredicted RBP11.93□□□□□ -0.5
TROAP-211ENST00000549891 GUSBP08236 651 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 THBS2P35442 1172 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 PGM1P36871 562 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 HTR3AP46098 478 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 EFNA4P52798 201 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 TGFBR3Q03167 851 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 SPOCK1Q08629 439 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 GABRA6Q16445 453 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 C17orf78Q8N4C9 275 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 FAM71CQ8NEG0 241 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 C1orf162Q8NEQ5 155 aaPredicted RBP11.93□□□□□ -0.5
TROAP-211ENST00000549891 MIPOL1Q8TD10 442 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 C3orf30Q96M34 536 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 MECRQ9BV79 373 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 OR51I1Q9H343 314 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 CTPS2Q9NRF8 586 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 NOP53Q9NZM5 478 aaKnown RBP11.93□□□□□ -0.5
TROAP-211ENST00000549891 UPB1Q9UBR1 384 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 KCNE5Q9UJ90 142 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 AMDHD2Q9Y303 409 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 WDR45Q9Y484 360 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 ATP23Q9Y6H3 246 aa11.93□□□□□ -0.5
TROAP-211ENST00000549891 ARFGEF3Q5TH69 2177 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 MALRD1Q5VYJ5 2156 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 A0A1W2PR80 420 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 RNASET2O00584 256 aaKnown RBP11.92□□□□□ -0.5
TROAP-211ENST00000549891 EIF1BO60739 113 aaKnown RBP11.92□□□□□ -0.5
TROAP-211ENST00000549891 G6PDP11413 515 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 USF1P22415 310 aaPredicted RBP11.92□□□□□ -0.5
TROAP-211ENST00000549891 APOBEC3AP31941 199 aaPredicted RBP11.92□□□□□ -0.5
TROAP-211ENST00000549891 CLDN8P56748 225 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 EMX2Q04743 252 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 SMU1Q2TAY7 513 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 CASP12Q6UXS9 341 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 ARFGAP2Q8N6H7 521 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 VPS37AQ8NEZ2 397 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 OR4A15Q8NGL6 344 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 C10orf105Q8TEF2 133 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 HTRA1Q92743 480 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 ARL5BQ96KC2 179 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 NAA11Q9BSU3 229 aaPredicted RBP11.92□□□□□ -0.5
TROAP-211ENST00000549891 SERHL2Q9H4I8 314 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 MANSC1Q9H8J5 431 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 EXOSC3Q9NQT5 275 aaKnown RBP11.92□□□□□ -0.5
TROAP-211ENST00000549891 TMEM181Q9P2C4 612 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 DCTN4Q9UJW0 460 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 TRAPPC4Q9Y296 219 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 SLC9A8Q9Y2E8 581 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 FKBP7Q9Y680 259 aa11.92□□□□□ -0.5
TROAP-211ENST00000549891 CENPVL1A0A0U1RR11 272 aa11.91□□□□□ -0.5
TROAP-211ENST00000549891 TLDC2A0PJX2 215 aa11.91□□□□□ -0.5
TROAP-211ENST00000549891 WNT11O96014 354 aa11.91□□□□□ -0.5
TROAP-211ENST00000549891 ITGA5P08648 1049 aa11.91□□□□□ -0.5
TROAP-211ENST00000549891 IGHV4-31P0DP07 118 aa11.91□□□□□ -0.5
TROAP-211ENST00000549891 RYKP34925 604 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms