RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 FAAP20Q6NZ36 180 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 CAMKVQ8NCB2 501 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 RPLP0P6Q8NHW5 317 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 SLC37A2Q8TED4 501 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 DEDD2Q8WXF8 326 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 RFT1Q96AA3 541 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 KRCC1Q9NPI7 259 aaPredicted RBP12.59□□□□□ -0.39
BNIP3-202ENST00000540159 LRIT1Q9P2V4 623 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 ITGB1BP2Q9UKP3 347 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 COL6A3P12111 3177 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 A0A0A6YYJ9 748 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 GPR75O95800 540 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 ZNF3P17036 446 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 GIFP27352 417 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 ERVK-25P63136 954 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 SHHQ15465 462 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 CEBPEQ15744 281 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 THOC7Q6I9Y2 204 aaKnown RBP12.59□□□□□ -0.39
BNIP3-202ENST00000540159 USP53Q70EK8 1073 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 GID4Q8IVV7 300 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 FAM160A2Q8N612 972 aaPredicted RBP12.59□□□□□ -0.39
BNIP3-202ENST00000540159 ZNF671Q8TAW3 534 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 SNX33Q8WV41 574 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 IRF2BPLQ9H1B7 796 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 NKX2-4Q9H2Z4 354 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 CMC2Q9NRP2 79 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 ASB6Q9NWX5 421 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 CPNE7Q9UBL6 633 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 RWDD3Q9Y3V2 267 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 HEBP2Q9Y5Z4 205 aa12.59□□□□□ -0.39
BNIP3-202ENST00000540159 PRR19A6NJB7 356 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 RGS13O14921 159 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 FABP7O15540 132 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 HCN1O60741 890 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 ILF3Q12906 894 aaKnown RBP eCLIP12.58□□□□□ -0.39
BNIP3-202ENST00000540159 MRPL28Q13084 256 aaKnown RBP12.58□□□□□ -0.39
BNIP3-202ENST00000540159 NTRK2Q16620 822 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 FBXO46Q6PJ61 603 aaPredicted RBP12.58□□□□□ -0.39
BNIP3-202ENST00000540159 KIRREL2Q6UWL6 708 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 LNX2Q8N448 690 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 OR4C3Q8NH37 302 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 OR8K3Q8NH51 312 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 HSD17B8Q92506 261 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 ERVMER34-1Q9H9K5 563 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 TEKT2Q9UIF3 430 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 OR10H1Q9Y4A9 318 aa12.58□□□□□ -0.39
BNIP3-202ENST00000540159 A0A1B0GTH9 108 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 TCRBV21S2A2A0A5A6 115 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 ERVH48-1M5A8F1 160 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 ORC5O43913 435 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 FZD7O75084 574 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 RCBTB2O95199 551 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 CBX7O95931 251 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 IFNA16P05015 189 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 PRKCAP17252 672 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 ATF1P18846 271 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 PSG6Q00889 435 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 STX4Q12846 297 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 CCDC58Q4VC31 144 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 HBMQ6B0K9 141 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 SFRP4Q6FHJ7 346 aaPredicted RBP12.58□□□□□ -0.4
BNIP3-202ENST00000540159 PRSS58Q8IYP2 241 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 CDRT4Q8N9R6 151 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 KLHDC3Q9BQ90 382 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 ABCA7Q8IZY2 2146 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 TGFBR3LH3BV60 316 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 CYR61O00622 381 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 OR2B3O76000 313 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 CXCL3P19876 107 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 SSTR2P30874 369 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 MLLT3P42568 568 aaPredicted RBP12.58□□□□□ -0.4
BNIP3-202ENST00000540159 SOX2P48431 317 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 TPMTP51580 245 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 PRAMEF8Q5VWM4 474 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 PRAMEF7Q5VXH5 474 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 ZNF511Q8NB15 262 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 SLC22A18Q96BI1 424 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 TRPV4Q9HBA0 871 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 ING1Q9UK53 422 aaPredicted RBP12.58□□□□□ -0.4
BNIP3-202ENST00000540159 NCKAP1Q9Y2A7 1128 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 SPACA6W5XKT8 324 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 DENND4AQ7Z401 1863 aa12.58□□□□□ -0.4
BNIP3-202ENST00000540159 URADA6NGE7 173 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 J3QRE1 110 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 RAD1O60671 282 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 GPANK1O95872 356 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 CTHP32929 405 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 THBS2P35442 1172 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 PITPNBP48739 271 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 RRAS2P62070 204 aaPredicted RBP12.57□□□□□ -0.4
BNIP3-202ENST00000540159 SF3A2Q15428 464 aaKnown RBP12.57□□□□□ -0.4
BNIP3-202ENST00000540159 NDUFA5Q16718 116 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 FHL5Q5TD97 284 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 KANSL1Q7Z3B3 1105 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 PRR22Q8IZ63 422 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 BRIX1Q8TDN6 353 aaKnown RBP12.57□□□□□ -0.4
BNIP3-202ENST00000540159 THAP4Q8WY91 577 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 RBM18Q96H35 190 aaKnown RBP12.57□□□□□ -0.4
BNIP3-202ENST00000540159 GAL3ST1Q99999 423 aa12.57□□□□□ -0.4
BNIP3-202ENST00000540159 SOSTQ9BQB4 213 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms