RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 TRPC5OSA6NMA1 111 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 VSTM5A8MXK1 200 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 M0R1B8 84 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 OIP5O43482 229 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 FCMRO60667 390 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 SCN2BO60939 215 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 NTN1O95631 604 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 WNT11O96014 354 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 NR2F1P10589 423 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 CCNA2P20248 432 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 PAX7P23759 505 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 CXCR1P25024 350 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 IDH2P48735 452 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 POLR2HP52434 150 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 CASP9P55211 416 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 VSNL1P62760 191 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 C1QTNF12Q5T7M4 302 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 HEPHL1Q6MZM0 1159 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 PODNL1Q6PEZ8 512 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF621Q6ZSS3 439 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF781Q8N8C0 355 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 OR52N5Q8NH56 324 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 MIPOL1Q8TD10 442 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 RAB8BQ92930 207 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 TESCQ96BS2 214 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 PKNOX2Q96KN3 472 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF300Q96RE9 604 aaPredicted RBP11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 SLCO5A1Q9H2Y9 848 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 SSU72Q9NP77 194 aaKnown RBP11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 CTPS2Q9NRF8 586 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 YAE1D1Q9NRH1 226 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 AMDHD2Q9Y303 409 aa11.72□□□□□ -0.53
CLSTN3-205ENST00000535452 HRNRQ86YZ3 2850 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF814B7Z6K7 855 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 ETV2O00321 342 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 SSX4O60224 188 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 H6PDO95479 791 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 IGHV3-9P01782 118 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 DBIP07108 87 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 SOD3P08294 240 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 CSF3P09919 207 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 NCF2P19878 526 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 COX5AP20674 150 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 IGHV1-2P23083 117 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 FABP6P51161 128 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF83P51522 516 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 ZSWIM7Q19AV6 140 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 FAM174BQ3ZCQ3 159 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 TYW3Q6IPR3 259 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 DNAJC14Q6Y2X3 702 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 CLEC4FQ8N1N0 589 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 WDR60Q8WVS4 1066 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 NEURL3Q96EH8 262 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 TRNT1Q96Q11 434 aaKnown RBP11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 OR52E6Q96RD3 313 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 DHRS9Q9BPW9 319 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 NUF2Q9BZD4 464 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 TRIM2Q9C040 744 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 RMND5AQ9H871 391 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 MTHFD2LQ9H903 347 aaPredicted RBP11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 CBLN4Q9NTU7 201 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 BTNL2Q9UIR0 455 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 PRDM4Q9UKN5 801 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 ZNF232Q9UNY5 417 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 TRAPPC4Q9Y296 219 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 FKBP7Q9Y680 259 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 ATP23Q9Y6H3 246 aa11.71□□□□□ -0.53
CLSTN3-205ENST00000535452 HIVEP2P31629 2446 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 NIPBLQ6KC79 2804 aaeCLIP11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 IGKV3D-15A0A087WSY6 115 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 TMED7-TICAM2A0A0A6YYA0 188 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 DPRXA6NFQ7 191 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 CFAP73A6NFT4 308 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 CCDC154A6NI56 674 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 ESPNB1AK53 854 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 SLCO1B7G3V0H7 640 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 ZNF208O43345 1280 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 TYROBPO43914 113 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 EFNA2O43921 213 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 CRLF1O75462 422 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 GPIP06744 558 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 DANCRP0C864 163 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 NID1P14543 1247 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 PGM1P36871 562 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 ACVR1BP36896 505 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 PRPS1P60891 318 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 LARS2Q15031 903 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 GSTA3Q16772 222 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 CHRFAM7AQ494W8 412 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 SPANXN4Q5MJ08 99 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 NXNQ6DKJ4 435 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 TMEM225Q6GV28 225 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 ABLIM2Q6H8Q1 611 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 ZNF544Q6NX49 715 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 SPATA19Q7Z5L4 167 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 RNF130Q86XS8 419 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 MUC15Q8N387 334 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 C17orf78Q8N4C9 275 aa11.7□□□□□ -0.54
CLSTN3-205ENST00000535452 GLB1L3Q8NCI6 653 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms