RNA–Protein interactions for RNA: ENST00000534656.2

CCDC84-208, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-208ENST00000534656 PIGXQ8TBF5 258 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 AGR3Q8TD06 166 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 EPS8L3Q8TE67 593 aaKnown RBP12.2□□□□□ -0.46
CCDC84-208ENST00000534656 C10orf105Q8TEF2 133 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 UBLCP1Q8WVY7 318 aaPredicted RBP12.2□□□□□ -0.46
CCDC84-208ENST00000534656 PROX1Q92786 737 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 ARL5BQ96KC2 179 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 INPP5KQ9BT40 448 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 MECRQ9BV79 373 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 CCDC106Q9BWC9 280 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 ZNF350Q9GZX5 532 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 MANSC1Q9H8J5 431 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 CTPS2Q9NRF8 586 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 MKS1Q9NXB0 559 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 LPAR3Q9UBY5 353 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 MALT1Q9UDY8 824 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 CHRNA9Q9UGM1 479 aa12.2□□□□□ -0.46
CCDC84-208ENST00000534656 ANKRD28O15084 1053 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 DNPH1O43598 174 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 MRPL33O75394 65 aaKnown RBP12.19□□□□□ -0.46
CCDC84-208ENST00000534656 ITGA5P08648 1049 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 IGHV4-31P0DP07 118 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 FKBP2P26885 142 aaKnown RBP12.19□□□□□ -0.46
CCDC84-208ENST00000534656 PGM1P36871 562 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 CLK1P49759 484 aaKnown RBP12.19□□□□□ -0.46
CCDC84-208ENST00000534656 EFNA4P52798 201 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 SLC16A1P53985 500 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 FOXG1P55316 489 aaPredicted RBP12.19□□□□□ -0.46
CCDC84-208ENST00000534656 MAPK14Q16539 360 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 PGS1Q32NB8 556 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 C16orf62Q7Z3J2 963 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 CCDC103Q8IW40 242 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 WDR31Q8NA23 367 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 FAM71CQ8NEG0 241 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 ZNF563Q8TA94 476 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 OIT3Q8WWZ8 545 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 SLC35G5Q96KT7 338 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 C1QTNF6Q9BXI9 259 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 SHARPINQ9H0F6 387 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 EXD2Q9NVH0 621 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 SLC35A3Q9Y2D2 325 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 HDGFL3Q9Y3E1 203 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 CADP27708 2225 aa12.19□□□□□ -0.46
CCDC84-208ENST00000534656 PDLIM1O00151 329 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 SKAP2O75563 359 aaPredicted RBP12.18□□□□□ -0.46
CCDC84-208ENST00000534656 GUSBP08236 651 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 CSF3P09919 207 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 G6PDP11413 515 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 BMP4P12644 408 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 ZNF16P17020 682 aaPredicted RBP12.18□□□□□ -0.46
CCDC84-208ENST00000534656 USF1P22415 310 aaPredicted RBP12.18□□□□□ -0.46
CCDC84-208ENST00000534656 APOBEC3AP31941 199 aaPredicted RBP12.18□□□□□ -0.46
CCDC84-208ENST00000534656 THBS2P35442 1172 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 MAGEA8P43361 318 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 CLDN8P56748 225 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 LSM11P83369 360 aaKnown RBP eCLIP12.18□□□□□ -0.46
CCDC84-208ENST00000534656 CHRNB3Q05901 458 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 KRTAP24-1Q3LI83 254 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 AP1ARQ63HQ0 302 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 ZCCHC23Q6ZST2 131 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 GRINAQ7Z429 371 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 ADGRG3Q86Y34 549 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 CLECL1Q8IZS7 167 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 CLEC4FQ8N1N0 589 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 EIF1ADQ8N9N8 165 aaKnown RBP12.18□□□□□ -0.46
CCDC84-208ENST00000534656 OR52E4Q8NGH9 312 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 MIPOL1Q8TD10 442 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 TUBGCP3Q96CW5 907 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 DNAJA3Q96EY1 480 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 APOPT1Q96IL0 206 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 AMBRA1Q9C0C7 1298 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 OR51I1Q9H343 314 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 FKRPQ9H9S5 495 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 SLC17A7Q9P2U7 560 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 ZDHHC2Q9UIJ5 367 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 DCTN4Q9UJW0 460 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 TRAPPC4Q9Y296 219 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 ATP23Q9Y6H3 246 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 PMF1-BGLAPU3KQ54 211 aa12.18□□□□□ -0.46
CCDC84-208ENST00000534656 RNF103-CHMP3A0A140T963 221 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 KIAA0513O60268 411 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 LMX1BO60663 402 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 BCAS1O75363 584 aaPredicted RBP12.17□□□□□ -0.46
CCDC84-208ENST00000534656 AGR2O95994 175 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 OR12D1P0DN82 309 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 ARRB2P32121 409 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 RYKP34925 604 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 SERPINB5P36952 375 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 OR2B6P58173 313 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 H3F3AP84243 136 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 MAD2L1Q13257 205 aaPredicted RBP12.17□□□□□ -0.46
CCDC84-208ENST00000534656 OR4F3Q6IEY1 312 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 TYW3Q6IPR3 259 aaKnown RBP12.17□□□□□ -0.46
CCDC84-208ENST00000534656 CASP12Q6UXS9 341 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 C17orf78Q8N4C9 275 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 C1orf162Q8NEQ5 155 aaPredicted RBP12.17□□□□□ -0.46
CCDC84-208ENST00000534656 KIF18AQ8NI77 898 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 XAGE5Q8WWM1 108 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 OR11A1Q9GZK7 315 aa12.17□□□□□ -0.46
CCDC84-208ENST00000534656 SAP130Q9H0E3 1048 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms