RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 ME2P23368 584 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 ELK4P28324 431 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 ADH6P28332 368 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 RYKP34925 604 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 LHX2P50458 406 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 GZMMP51124 257 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 SLC7A2P52569 658 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 PCBP3P57721 371 aaKnown RBP9.11□□□□□ -0.95
VPS28-204ENST00000526054 EEFSECP57772 596 aaKnown RBP9.11□□□□□ -0.95
VPS28-204ENST00000526054 PSME3P61289 254 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 EEF1A1P68104 462 aaKnown RBP9.11□□□□□ -0.95
VPS28-204ENST00000526054 MXRA7P84157 204 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 VEZF1Q14119 521 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 BCL2A1Q16548 175 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 TMEM44Q2T9K0 475 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 DHRS4L2Q6PKH6 230 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 CHMP1BQ7LBR1 199 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 ARMC8Q8IUR7 673 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 GRAMD2AQ8IUY3 354 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 SLC15A3Q8IY34 581 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 OR2T12Q8NG77 320 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 OR5M1Q8NGP8 315 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 LINC01560Q8TB33 94 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 ZPLD1Q8TCW7 415 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 SMPDL3BQ92485 455 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 CNOT9Q92600 299 aaKnown RBP9.11□□□□□ -0.95
VPS28-204ENST00000526054 SLC35B4Q969S0 331 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 MBD6Q96DN6 1003 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 MRGPRX4Q96LA9 322 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 ZNF583Q96ND8 569 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 ZFP3Q96NJ6 502 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 SFXN3Q9BWM7 321 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 PIF1Q9H611 641 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 EVA1AQ9H8M9 152 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 ARL8BQ9NVJ2 186 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 CMTM6Q9NX76 183 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 KLHL28Q9NXS3 571 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 JKAMPQ9P055 326 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 AP4B1Q9Y6B7 739 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 MPDZO75970 2070 aa9.11□□□□□ -0.95
VPS28-204ENST00000526054 GJE1A6NN92 205 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 SHISA8B8ZZ34 492 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 FAAHO00519 579 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 SEC14L5O43304 696 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 BCAS1O75363 584 aaPredicted RBP9.1□□□□□ -0.95
VPS28-204ENST00000526054 UBOX5O94941 541 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 HOXB4P17483 251 aaPredicted RBP9.1□□□□□ -0.95
VPS28-204ENST00000526054 STARP49675 285 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 CLDN18P56856 261 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 RPS3AP61247 264 aaKnown RBP9.1□□□□□ -0.95
VPS28-204ENST00000526054 COPZ1P61923 177 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 RAC1P63000 192 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 ADAM8P78325 824 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 PLAURQ03405 335 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 SRYQ05066 204 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 LIPEQ05469 1076 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 EPS8Q12929 822 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 FOXF2Q12947 444 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 SELENBP1Q13228 472 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 POU4F3Q15319 338 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 TOMM34Q15785 309 aaPredicted RBP9.1□□□□□ -0.95
VPS28-204ENST00000526054 DEFB113Q30KQ7 82 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 SLC25A53Q5H9E4 307 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 C8orf82Q6P1X6 216 aaPredicted RBP9.1□□□□□ -0.95
VPS28-204ENST00000526054 C16orf89Q6UX73 402 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 GRINAQ7Z429 371 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 LUZP2Q86TE4 346 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 UBQLNLQ8IYU4 475 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 MICU2Q8IYU8 434 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 GCNT2Q8N0V5 402 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 PGAM4Q8N0Y7 254 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 CLIP4Q8N3C7 705 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 FBXO27Q8NI29 283 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 POC1BQ8TC44 478 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 SLC26A7Q8TE54 656 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 RASSF5Q8WWW0 418 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 NSL1Q96IY1 281 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 TM9SF2Q99805 663 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 KLHDC3Q9BQ90 382 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 TUBA1CQ9BQE3 449 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 RBM24Q9BX46 236 aaKnown RBP9.1□□□□□ -0.95
VPS28-204ENST00000526054 PINK1Q9BXM7 581 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 ALG2Q9H553 416 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 SPAG4Q9NPE6 437 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 DLL4Q9NR61 685 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 ACER3Q9NUN7 267 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 RLIMQ9NVW2 624 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 GALNT8Q9NY28 637 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 ABCD2Q9UBJ2 740 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 PRDM4Q9UKN5 801 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 ZNF337Q9Y3M9 751 aa9.1□□□□□ -0.95
VPS28-204ENST00000526054 SPIN1Q9Y657 262 aaPredicted RBP9.1□□□□□ -0.95
VPS28-204ENST00000526054 NIPBLQ6KC79 2804 aaeCLIP9.1□□□□□ -0.95
VPS28-204ENST00000526054 FLNAP21333 2647 aaKnown RBP9.1□□□□□ -0.95
VPS28-204ENST00000526054 ELOVL7A1L3X0 281 aa9.09□□□□□ -0.95
VPS28-204ENST00000526054 SH3D21A4FU49 640 aa9.09□□□□□ -0.95
VPS28-204ENST00000526054 M0QX08 132 aa9.09□□□□□ -0.95
VPS28-204ENST00000526054 ETV2O00321 342 aaPredicted RBP9.09□□□□□ -0.95
VPS28-204ENST00000526054 NME4O00746 187 aa9.09□□□□□ -0.95
VPS28-204ENST00000526054 AP3D1O14617 1153 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms