RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 KCNE5Q9UJ90 142 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 SLC35A3Q9Y2D2 325 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 HDGFL3Q9Y3E1 203 aa13.1□□□□□ -0.31
PRKDC-204ENST00000521331 NBEAL1Q6ZS30 2694 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 ZNF716A6NP11 495 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 FCMRO60667 390 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 MRPL33O75394 65 aaKnown RBP13.09□□□□□ -0.31
PRKDC-204ENST00000521331 UGT2B17O75795 530 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 PMS2P2O95744 297 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 AGR2O95994 175 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 F12P00748 615 aaPredicted RBP13.09□□□□□ -0.31
PRKDC-204ENST00000521331 GUSBP08236 651 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 SERPINB5P36952 375 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 CLK1P49759 484 aaKnown RBP13.09□□□□□ -0.31
PRKDC-204ENST00000521331 SLC16A1P53985 500 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 RPS26P62854 115 aaKnown RBP13.09□□□□□ -0.31
PRKDC-204ENST00000521331 C1QTNF12Q5T7M4 302 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 CYB5R2Q6BCY4 276 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 C16orf62Q7Z3J2 963 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 C6orf120Q7Z4R8 191 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 ALPK2Q86TB3 2170 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 GSPT2Q8IYD1 628 aaKnown RBP13.09□□□□□ -0.31
PRKDC-204ENST00000521331 ZNF525Q8N782 197 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 KIF18AQ8NI77 898 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 AGR3Q8TD06 166 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 PROX1Q92786 737 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 APOPT1Q96IL0 206 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 SLC35G5Q96KT7 338 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 MUS81Q96NY9 551 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 INPP5KQ9BT40 448 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 CCDC106Q9BWC9 280 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 SERHL2Q9H4I8 314 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 POLE3Q9NRF9 147 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
PRKDC-204ENST00000521331 CENPVL1A0A0U1RR11 272 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 RNF103-CHMP3A0A140T963 221 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 M0R1B8 84 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 KIAA0513O60268 411 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 PGM1P36871 562 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 MAGEA8P43361 318 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 EFNA4P52798 201 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 CHRNB3Q05901 458 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 SPOCK1Q08629 439 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 MAD2L1Q13257 205 aaPredicted RBP13.08□□□□□ -0.32
PRKDC-204ENST00000521331 GABRA6Q16445 453 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 ATAD3BQ5T9A4 648 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 B3GLCTQ6Y288 498 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 GRINAQ7Z429 371 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 C17orf78Q8N4C9 275 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 FAM71CQ8NEG0 241 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 ZNF563Q8TA94 476 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 MIPOL1Q8TD10 442 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 TUBGCP3Q96CW5 907 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 C3orf30Q96M34 536 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 MECRQ9BV79 373 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 AMBRA1Q9C0C7 1298 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 SHARPINQ9H0F6 387 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 MANSC1Q9H8J5 431 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 FKRPQ9H9S5 495 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 CTPS2Q9NRF8 586 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 PMF1-BGLAPU3KQ54 211 aa13.08□□□□□ -0.32
PRKDC-204ENST00000521331 RNASET2O00584 256 aaKnown RBP13.07□□□□□ -0.32
PRKDC-204ENST00000521331 G6PDP11413 515 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 THBS2P35442 1172 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 CLDN8P56748 225 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 PGS1Q32NB8 556 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 C1orf162Q8NEQ5 155 aaPredicted RBP13.07□□□□□ -0.32
PRKDC-204ENST00000521331 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 EXOSC3Q9NQT5 275 aaKnown RBP13.07□□□□□ -0.32
PRKDC-204ENST00000521331 PARPBPQ9NWS1 579 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 DCTN4Q9UJW0 460 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 PCDHGB4Q9UN71 923 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 AMDHD2Q9Y303 409 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 WDR45Q9Y484 360 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 ATP23Q9Y6H3 246 aa13.07□□□□□ -0.32
PRKDC-204ENST00000521331 A0A1W2PR80 420 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 PDLIM1O00151 329 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 EIF1BO60739 113 aaKnown RBP13.06□□□□□ -0.32
PRKDC-204ENST00000521331 SKAP2O75563 359 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-204ENST00000521331 ITGA5P08648 1049 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 IGHV4-31P0DP07 118 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 USF1P22415 310 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-204ENST00000521331 APOBEC3AP31941 199 aaPredicted RBP13.06□□□□□ -0.32
PRKDC-204ENST00000521331 NTF4P34130 210 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 RYKP34925 604 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 HTR3AP46098 478 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 OR2B6P58173 313 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 TGFBR3Q03167 851 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 EMX2Q04743 252 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 MAPK14Q16539 360 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 AP1ARQ63HQ0 302 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 CASP12Q6UXS9 341 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 ZCCHC23Q6ZST2 131 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 CLECL1Q8IZS7 167 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 OR4A15Q8NGL6 344 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 HTRA1Q92743 480 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 ARL5BQ96KC2 179 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 OR51I1Q9H343 314 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 ASIC5Q9NY37 505 aa13.06□□□□□ -0.32
PRKDC-204ENST00000521331 NOP53Q9NZM5 478 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms