RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 LSRQ86X29 649 aaPredicted RBP11.28□□□□□ -0.6
SPIDR-209ENST00000519141 TMEM156Q8N614 296 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 OR52L1Q8NGH7 329 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 BRIX1Q8TDN6 353 aaKnown RBP11.28□□□□□ -0.6
SPIDR-209ENST00000519141 GPR119Q8TDV5 335 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 SGTBQ96EQ0 304 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 IP6K3Q96PC2 410 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 KLHDC3Q9BQ90 382 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 TMEM43Q9BTV4 400 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 TSSK6Q9BXA6 273 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 ASCL3Q9NQ33 180 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 TAS2R10Q9NYW0 307 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 IL20Q9NYY1 176 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 IL17BQ9UHF5 180 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 WIF1Q9Y5W5 379 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 NBEAQ8NFP9 2946 aa11.28□□□□□ -0.6
SPIDR-209ENST00000519141 URB1O60287 2271 aaKnown RBP11.28□□□□□ -0.6
SPIDR-209ENST00000519141 SMG1Q96Q15 3661 aaKnown RBP11.27□□□□□ -0.6
SPIDR-209ENST00000519141 HTR3EA5X5Y0 456 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 C2orf72A6NCS6 295 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 HCN1O60741 890 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 GABRB1P18505 474 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 CXCR1P25024 350 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 MSX1P28360 303 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 RPL5P46777 297 aaKnown RBP11.27□□□□□ -0.6
SPIDR-209ENST00000519141 NR1H2P55055 460 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 CSNK2BP67870 215 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 TOMM34Q15785 309 aaPredicted RBP11.27□□□□□ -0.6
SPIDR-209ENST00000519141 SMN1Q16637 294 aaKnown RBP11.27□□□□□ -0.6
SPIDR-209ENST00000519141 CLEC12AQ5QGZ9 265 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 OR5M10Q6IEU7 315 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 ZNF773Q6PK81 442 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 DTX1Q86Y01 620 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 CCDC103Q8IW40 242 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 OR8J1Q8NGP2 316 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 OR13C2Q8NGS9 318 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 ADAMTS17Q8TE56 1095 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 TRUB1Q8WWH5 349 aaKnown RBP11.27□□□□□ -0.6
SPIDR-209ENST00000519141 TMEM234Q8WY98 164 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 SLC38A2Q96QD8 506 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 SECISBP2Q96T21 854 aaKnown RBP11.27□□□□□ -0.6
SPIDR-209ENST00000519141 ADAM19Q9H013 955 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 OR52D1Q9H346 318 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 CLN6Q9NWW5 311 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 TVP23BQ9NYZ1 205 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 CHCHD2Q9Y6H1 151 aaPredicted RBP11.27□□□□□ -0.6
SPIDR-209ENST00000519141 PCNX3Q9H6A9 2034 aa11.27□□□□□ -0.6
SPIDR-209ENST00000519141 IGKV1D-42A0A075B6H8 117 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 DPPA5A6NC42 116 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 TRIM64CA6NLI5 447 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 BMP7P18075 431 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 FUT1P19526 365 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 PTGDSP41222 190 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 CASP3P42574 277 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 HTR3AP46098 478 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 PCYT1AP49585 367 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 POLR2HP52434 150 aaKnown RBP11.27□□□□□ -0.61
SPIDR-209ENST00000519141 SNRPGP62308 76 aaKnown RBP11.27□□□□□ -0.61
SPIDR-209ENST00000519141 SNTA1Q13424 505 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 ST3GAL2Q16842 350 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 PGGHGQ32M88 737 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 ACSM5Q6NUN0 579 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 H3F3CQ6NXT2 135 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 SLC30A6Q6NXT4 461 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 JMJD6Q6NYC1 403 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-209ENST00000519141 GRINAQ7Z429 371 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 OAFQ86UD1 273 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 SIRT6Q8N6T7 355 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 TCEANCQ8N8B7 351 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 OR2T33Q8NG76 320 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 ST8SIA1Q92185 356 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 SAMD8Q96LT4 415 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 IL4I1Q96RQ9 567 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 POLDIP3Q9BY77 421 aaKnown RBP11.27□□□□□ -0.61
SPIDR-209ENST00000519141 CCNB1IP1Q9NPC3 277 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 HPF1Q9NWY4 346 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 OSGIN1Q9UJX0 560 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 SIGLEC7Q9Y286 467 aa11.27□□□□□ -0.61
SPIDR-209ENST00000519141 CPAMD8Q8IZJ3 1885 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 DOCK10Q96BY6 2186 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 FAM208BQ5VWN6 2430 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 TRAV27A0A087WT01 109 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 IGLV3-32A0A0A0MS00 114 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 A6NHS1 94 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 PTGES3LE9PB15 166 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 IGF2P01344 180 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 TFAP2AP05549 437 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 LIPCP11150 499 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 SLC9A3P48764 834 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 ST13P50502 369 aaKnown RBP11.26□□□□□ -0.61
SPIDR-209ENST00000519141 ZNF41P51814 821 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-209ENST00000519141 SNAPC1Q16533 368 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 PRAMEF20Q5VT98 475 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 TMEM81Q6P7N7 255 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 POMZP3Q6PJE2 187 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 SMARCD3Q6STE5 483 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 KDF1Q8NAX2 398 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-209ENST00000519141 ZNF540Q8NDQ6 660 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 ZNF524Q96C55 264 aa11.26□□□□□ -0.61
SPIDR-209ENST00000519141 THOC3Q96J01 351 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms