RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 GRK5P34947 590 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 PIGAP37287 484 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 NAA10P41227 235 aaPredicted RBP4.72□□□□□ -1.65
PHF3-210ENST00000509876 RBM34P42696 430 aaKnown RBP4.72□□□□□ -1.65
PHF3-210ENST00000509876 HOXC5Q00444 222 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 C9orf135Q5VTT2 229 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 H1FNTQ75WM6 255 aaPredicted RBP4.72□□□□□ -1.65
PHF3-210ENST00000509876 VN1R4Q7Z5H5 301 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 OR13C3Q8NGS6 347 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 NUBPLQ8TB37 319 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 ZC3HAV1LQ96H79 300 aaKnown RBP4.72□□□□□ -1.65
PHF3-210ENST00000509876 BOD1Q96IK1 185 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 ANKRD19PQ9H560 264 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 MMP25Q9NPA2 562 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 PLEK2Q9NYT0 353 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 MYOTQ9UBF9 498 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 GLSO94925 669 aaPredicted RBP4.72□□□□□ -1.65
PHF3-210ENST00000509876 TBXA2RP21731 343 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 PRKACGP22612 351 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 SDC2P34741 201 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 ERVK-25P63136 954 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 APOFQ13790 326 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 PLAG1Q6DJT9 500 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 C3P1Q6ZMU1 363 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.72□□□□□ -1.65
PHF3-210ENST00000509876 ZNF101Q8IZC7 436 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 LSM14AQ8ND56 463 aaKnown RBP4.72□□□□□ -1.65
PHF3-210ENST00000509876 SEMA4CQ9C0C4 833 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 FKRPQ9H9S5 495 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 DECR2Q9NUI1 292 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 DNAJC27Q9NZQ0 273 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 TNFRSF1BP20333 461 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 RFC3P40938 356 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 PSMD7P51665 324 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 LAPTM4AQ15012 233 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 NKPD1Q17RQ9 610 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 SPRED3Q2MJR0 410 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 FAM69AQ5T7M9 428 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 SLC35F2Q8IXU6 374 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 DTWD1Q8N5C7 304 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 PRR7Q8TB68 274 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 CPNE4Q96A23 557 aaPredicted RBP4.72□□□□□ -1.65
PHF3-210ENST00000509876 SDF2Q99470 211 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 MED18Q9BUE0 208 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 SCNM1Q9BWG6 230 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 YIPF3Q9GZM5 350 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 ELOVL3Q9HB03 270 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 SLC24A3Q9HC58 644 aa4.72□□□□□ -1.65
PHF3-210ENST00000509876 A0A1B0GWA3 101 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 UPK1AO00322 258 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 CHP2O43745 196 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 TBX19O60806 448 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 IFNA6P05013 189 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 MAP2K6P52564 334 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 CLDN6P56747 220 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 DUSP8Q13202 625 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 CRTC2Q53ET0 693 aaPredicted RBP4.71□□□□□ -1.65
PHF3-210ENST00000509876 PIGGQ5H8A4 983 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 FCRLAQ7L513 359 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 JAGN1Q8N5M9 183 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 CPEB3Q8NE35 698 aaKnown RBP4.71□□□□□ -1.65
PHF3-210ENST00000509876 OR11G2Q8NGC1 345 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 NINJ1Q92982 152 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 PKP2Q99959 881 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 NXF5Q9H1B4 397 aaKnown RBP4.71□□□□□ -1.65
PHF3-210ENST00000509876 TOR3AQ9H497 397 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 TUBB1Q9H4B7 451 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 RAB9BQ9NP90 201 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 ZFP64Q9NPA5 681 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 KLHL13Q9P2N7 655 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 LHX6Q9UPM6 363 aa4.71□□□□□ -1.65
PHF3-210ENST00000509876 MYO7AQ13402 2215 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 ISPDA4D126 451 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 OR6C70A6NIJ9 312 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 TNFSF11O14788 317 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 OR7A10O76100 309 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 ETHE1O95571 254 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 GADD45AP24522 165 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 RHAGQ02094 409 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 COL19A1Q14993 1142 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 RNF165Q6ZSG1 346 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 MBOAT2Q6ZWT7 520 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 MAELQ96JY0 434 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 YTHDF1Q9BYJ9 559 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 SLC19A3Q9BZV2 496 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 PAIP1Q9H074 479 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 CHST11Q9NPF2 352 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 USP22Q9UPT9 525 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 MRPS7Q9Y2R9 242 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 PRAMEF27A3QJZ7 478 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 TMEM8BA6NDV4 472 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 ACP2P11117 423 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 BIDP55957 195 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 SLC3A1Q07837 685 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 RNPS1Q15287 305 aaKnown RBP4.71□□□□□ -1.66
PHF3-210ENST00000509876 PRTGQ2VWP7 1150 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 LRFN4Q6PJG9 635 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 HS3ST5Q8IZT8 346 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 ELP5Q8TE02 316 aa4.71□□□□□ -1.66
PHF3-210ENST00000509876 INTS14Q96SY0 518 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms