RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 CDRT4Q8N9R6 151 aa12.11□□□□□ -0.47
DDR1-260ENST00000507533 FBXO30Q8TB52 745 aa12.11□□□□□ -0.47
DDR1-260ENST00000507533 OR5B2Q96R09 309 aa12.11□□□□□ -0.47
DDR1-260ENST00000507533 ZNF747Q9BV97 191 aa12.11□□□□□ -0.47
DDR1-260ENST00000507533 RAB1BQ9H0U4 201 aa12.11□□□□□ -0.47
DDR1-260ENST00000507533 TNFRSF12AQ9NP84 129 aa12.11□□□□□ -0.47
DDR1-260ENST00000507533 CARD8Q9Y2G2 431 aa12.11□□□□□ -0.47
DDR1-260ENST00000507533 AMDHD2Q9Y303 409 aa12.11□□□□□ -0.47
DDR1-260ENST00000507533 NOSIPQ9Y314 301 aaKnown RBP12.11□□□□□ -0.47
DDR1-260ENST00000507533 AZIN1O14977 448 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 SASH3O75995 380 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 SERPINE1P05121 402 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 FGF4P08620 206 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 ITGA5P08648 1049 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 IFI6P09912 130 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 ACP2P11117 423 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 PGCP20142 388 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 LIMS1P48059 325 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 RNF144AP50876 292 aaPredicted RBP12.1□□□□□ -0.47
DDR1-260ENST00000507533 IDH3GP51553 393 aaPredicted RBP12.1□□□□□ -0.47
DDR1-260ENST00000507533 ARFIP2P53365 341 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 WDR4P57081 412 aaKnown RBP12.1□□□□□ -0.47
DDR1-260ENST00000507533 SLC25A3Q00325 362 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 ZNF763Q0D2J5 394 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 TRIP10Q15642 601 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 CHI3L2Q15782 390 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 TTMPQ5BVD1 217 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 FAM71E1Q6IPT2 247 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 SHQ1Q6PI26 577 aaKnown RBP12.1□□□□□ -0.47
DDR1-260ENST00000507533 SHISA2Q6UWI4 295 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 TREML4Q6UXN2 200 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 THSD4Q6ZMP0 1018 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 ZNF551Q7Z340 670 aaPredicted RBP12.1□□□□□ -0.47
DDR1-260ENST00000507533 MTERF4Q7Z6M4 381 aaKnown RBP12.1□□□□□ -0.47
DDR1-260ENST00000507533 SVOPLQ8N434 492 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 SLC16A11Q8NCK7 471 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 CEP70Q8NHQ1 597 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 GPR119Q8TDV5 335 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 JMJD8Q96S16 334 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 PAIP2Q9BPZ3 127 aaKnown RBP12.1□□□□□ -0.47
DDR1-260ENST00000507533 SAP130Q9H0E3 1048 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 SLC17A5Q9NRA2 495 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 NKIRAS1Q9NYS0 192 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 MALT1Q9UDY8 824 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 ICAM5Q9UMF0 924 aa12.1□□□□□ -0.47
DDR1-260ENST00000507533 IGKV3D-15A0A087WSY6 115 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 HMGB1P1B2RPK0 211 aaPredicted RBP12.09□□□□□ -0.47
DDR1-260ENST00000507533 TMEM114B3SHH9 223 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 B4DSR2 109 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 H6PDO95479 791 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 NEFHP12036 1026 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 ARRB2P32121 409 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 NTF4P34130 210 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 GPC1P35052 558 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 PPOXP50336 477 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 SUMO3P55854 103 aaPredicted RBP12.09□□□□□ -0.47
DDR1-260ENST00000507533 HSPB3Q12988 150 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 PDK3Q15120 406 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 DUSP5Q16690 384 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 SPDYAQ5MJ70 313 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 CCNJQ5T5M9 372 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 C9orf135Q5VTT2 229 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 KANK2Q63ZY3 851 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 CLEC6AQ6EIG7 209 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 NUP43Q8NFH3 380 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 OR52E4Q8NGH9 312 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 ZNF524Q96C55 264 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 HIF1ANQ9NWT6 349 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 SPEF1Q9Y4P9 236 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 PCDHB14Q9Y5E9 798 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 ARFGEF3Q5TH69 2177 aa12.09□□□□□ -0.47
DDR1-260ENST00000507533 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 GTPBP1O00178 669 aaKnown RBP12.08□□□□□ -0.48
DDR1-260ENST00000507533 MRPL33O75394 65 aaKnown RBP12.08□□□□□ -0.48
DDR1-260ENST00000507533 CHEK2O96017 543 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 OR4A8P0C604 315 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 IFNGR1P15260 489 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 BGNP21810 368 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 DIO1P49895 249 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 ABCE1P61221 599 aaKnown RBP12.08□□□□□ -0.48
DDR1-260ENST00000507533 ADIPOQQ15848 244 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 SLC25A53Q5H9E4 307 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 ABLIM2Q6H8Q1 611 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 RNF165Q6ZSG1 346 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 IKBIPQ70UQ0 350 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 SZRD1Q7Z422 152 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 TRIM46Q7Z4K8 759 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 MTDHQ86UE4 582 aaKnown RBP12.08□□□□□ -0.48
DDR1-260ENST00000507533 ZNF786Q8N393 782 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 C17orf78Q8N4C9 275 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 LRRC17Q8N6Y2 441 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 COX18Q8N8Q8 333 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 MGARPQ8TDB4 240 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 NEU4Q8WWR8 484 aaPredicted RBP12.08□□□□□ -0.48
DDR1-260ENST00000507533 TMEM186Q96B77 213 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 GIMAP5Q96F15 307 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 OTUB1Q96FW1 271 aaPredicted RBP12.08□□□□□ -0.48
DDR1-260ENST00000507533 PLK3Q9H4B4 646 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 CA10Q9NS85 328 aa12.08□□□□□ -0.48
DDR1-260ENST00000507533 ZNF446Q9NWS9 450 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms