RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 TMEM43Q9BTV4 400 aa19.52■□□□□ 0.71
UBE2D3-216ENST00000503742 CCDC59Q9P031 241 aaKnown RBP19.52■□□□□ 0.71
UBE2D3-216ENST00000503742 PPIEQ9UNP9 301 aaKnown RBP19.52■□□□□ 0.71
UBE2D3-216ENST00000503742 TMEM221A6NGB7 291 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 SAGE2PA6NJ88 616 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 D6RAR5 112 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 M0R296 226 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 NDUFB2O95178 105 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 FGF5P12034 268 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 CCR4P51679 360 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 RNF4P78317 190 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 PSPHP78330 225 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 ZNF117Q03924 483 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 ITGADQ13349 1161 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 ANKDD1AQ495B1 522 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 LIPKQ5VXJ0 399 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 BPHLQ86WA6 291 aaPredicted RBP19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 TMCO5AQ8N6Q1 288 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 LRRC17Q8N6Y2 441 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 SLC37A3Q8NCC5 494 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 PSD4Q8NDX1 1056 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 KISS1RQ969F8 398 aaPredicted RBP19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 TP53INP1Q96A56 240 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 KLHDC3Q9BQ90 382 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 MESP1Q9BRJ9 268 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 ARHGAP9Q9BRR9 750 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 NXF2Q9GZY0 626 aaKnown RBP19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 CHRNA9Q9UGM1 479 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 STUB1Q9UNE7 303 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 A3GALT2U3KPV4 340 aa19.51■□□□□ 0.71
UBE2D3-216ENST00000503742 ELOA3DA6NLF2 546 aaPredicted RBP19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 RIIAD1A6NNX1 92 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 CLDN25C9JDP6 229 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 LRRN3E7EW58 273 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 PRR23D1E9PI22 279 aaPredicted RBP19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 WWP2O00308 870 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 OR7A10O76100 309 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 PRR23D2P0DMB1 279 aaPredicted RBP19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 HK1P19367 917 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 PSMA1P25786 263 aaKnown RBP19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 SLC6A8P48029 635 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 TMED1Q13445 227 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 TPBGQ13641 420 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 ELOA3BQ3SY89 546 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 ARMC4Q5T2S8 1044 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 ARHGAP11AQ6P4F7 1023 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 LHFPL3Q86UP9 236 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 SIRT6Q8N6T7 355 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 ELOA3Q8NG57 546 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 GATAD2BQ8WXI9 593 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 OTULINQ96BN8 352 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 C12orf10Q9HB07 376 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 PALMDQ9NP74 551 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 ERVK13-1Q9NX77 482 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 TNFRSF10DQ9UBN6 386 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 DMDP11532 3685 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 CCDC182A6NF36 153 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 SLC2A5P22732 501 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 IDUAP35475 653 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 CD79BP40259 229 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 ZNF404Q494X3 552 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 FCRLBQ6BAA4 426 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 MARCH3Q86UD3 253 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 OR9Q1Q8NGQ5 310 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 LIPHQ8WWY8 451 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 S100ZQ8WXG8 99 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 NACC2Q96BF6 587 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 CDADC1Q9BWV3 514 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 GTPBP2Q9BX10 602 aaKnown RBP19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 ADAM19Q9H013 955 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 SLC26A1Q9H2B4 701 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 MMP27Q9H306 513 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 ZNF337Q9Y3M9 751 aa19.5■□□□□ 0.71
UBE2D3-216ENST00000503742 EIF4E2O60573 245 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 ZNF3P17036 446 aa19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 RPS4XP62701 263 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 CRMP1Q14194 572 aa19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 LCN10Q6JVE6 187 aa19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 ZBTB44Q8NCP5 570 aa19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 OR5M3Q8NGP4 307 aa19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 MCFD2Q8NI22 146 aa19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 TRMT61AQ96FX7 289 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 SECISBP2Q96T21 854 aaKnown RBP19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 SPSB2Q99619 263 aa19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 WDR77Q9BQA1 342 aaPredicted RBP19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 SPIN1Q9Y657 262 aaPredicted RBP19.49■□□□□ 0.71
UBE2D3-216ENST00000503742 MPDZO75970 2070 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 ZC3H12DA2A288 527 aaKnown RBP19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 SLC22A31A6NKX4 558 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 J3QRK9 145 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 NDUFB5O43674 189 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 FADS1O60427 444 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 NOS3P29474 1203 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 EMP2P54851 167 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 ZFP36L1Q07352 338 aaKnown RBP19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 TRA2AQ13595 282 aaKnown RBP eCLIP19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 IL11RAQ14626 422 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 ZNF846Q147U1 533 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 B3GLCTQ6Y288 498 aa19.48■□□□□ 0.71
UBE2D3-216ENST00000503742 MFSD4AQ8N468 514 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms