RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 ADAM18Q9Y3Q7 739 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 MGAQ8IWI9 3026 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 CCDC159P0C7I6 412 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 IL11P20809 199 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 PTGDSP41222 190 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 SLC1A3P43003 542 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 LTBQ06643 244 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 CHAF1BQ13112 559 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 EIF3IQ13347 325 aaKnown RBP12.67□□□□□ -0.38
SMPD4-219ENST00000491128 FHL1Q13642 323 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 SSPNQ14714 243 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 RAB39AQ14964 217 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 RPS19BP1Q86WX3 136 aaKnown RBP12.67□□□□□ -0.38
SMPD4-219ENST00000491128 CYB561A3Q8NBI2 242 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 OR8K3Q8NH51 312 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 OR5W2Q8NH69 310 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 DNAJA4Q8WW22 397 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-219ENST00000491128 JSRP1Q96MG2 331 aaPredicted RBP12.67□□□□□ -0.38
SMPD4-219ENST00000491128 TMEM185BQ9H7F4 350 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 CDH10Q9Y6N8 788 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 COMMD3-BMI1R4GMX3 469 aa12.67□□□□□ -0.38
SMPD4-219ENST00000491128 URB1O60287 2271 aaKnown RBP12.67□□□□□ -0.38
SMPD4-219ENST00000491128 STMND1H3BQB6 276 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 PPP1R3DO95685 299 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 CCL3P10147 92 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 CASP3P42574 277 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 P2RX1P51575 399 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 EXT1Q16394 746 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 RNF113BQ8IZP6 322 aaKnown RBP12.66□□□□□ -0.38
SMPD4-219ENST00000491128 TMEM156Q8N614 296 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 SLC22A8Q8TCC7 542 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 GPR119Q8TDV5 335 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 SLC25A36Q96CQ1 311 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 NMD3Q96D46 503 aaKnown RBP12.66□□□□□ -0.38
SMPD4-219ENST00000491128 MPP4Q96JB8 637 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 TSC22D3Q99576 134 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 HCAR1Q9BXC0 346 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 LHPPQ9H008 270 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 DUSP21Q9H596 190 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 MMP25Q9NPA2 562 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 CLN6Q9NWW5 311 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 BLOC1S6Q9UL45 172 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMPD4-219ENST00000491128 TPRKBQ9Y3C4 175 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 LCKP06239 509 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 CLUP10909 449 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 ST3GAL4Q11206 333 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 TMPRSS11FQ6ZWK6 438 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 MRGPREQ86SM8 312 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 ZNF440Q8IYI8 595 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 TOR1AIP2Q8NFQ8 470 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 MOSPD2Q8NHP6 518 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 ASB15Q8WXK1 588 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 NKD1Q969G9 470 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 TAAR8Q969N4 342 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 YTHDF1Q9BYJ9 559 aaKnown RBP12.66□□□□□ -0.38
SMPD4-219ENST00000491128 MCCC2Q9HCC0 563 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 KRCC1Q9NPI7 259 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-219ENST00000491128 EXOSC3Q9NQT5 275 aaKnown RBP12.66□□□□□ -0.38
SMPD4-219ENST00000491128 PSORS1C1Q9UIG5 152 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 SNX5Q9Y5X3 404 aa12.66□□□□□ -0.38
SMPD4-219ENST00000491128 CHCHD2Q9Y6H1 151 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-219ENST00000491128 A0A1W2PQD3 144 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 CLCA1A8K7I4 914 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 MCIDASD6RGH6 385 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 FBXO45P0C2W1 286 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 BMP7P18075 431 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 CXCR1P25024 350 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 ALDH3B2P48448 385 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 RPS6KA3P51812 740 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 GAS1P54826 345 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 TUBA4AP68366 448 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 CBFBQ13951 182 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 EFR3AQ14156 821 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 DOC2BQ14184 412 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 PGGHGQ32M88 737 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 SYT14P1Q58G82 188 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 GPR107Q5VW38 600 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 OR2T33Q8NG76 320 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 M1APQ8TC57 530 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 SMAP2Q8WU79 429 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-219ENST00000491128 OSTF1Q92882 214 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 ZNF566Q969W8 418 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 SGTBQ96EQ0 304 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 POLR2J2Q9GZM3 115 aaKnown RBP12.65□□□□□ -0.38
SMPD4-219ENST00000491128 KLHL1Q9NR64 748 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 PPP4R1LQ9P1A2 415 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 RPH3AQ9Y2J0 694 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-219ENST00000491128 MPDZO75970 2070 aa12.65□□□□□ -0.38
SMPD4-219ENST00000491128 RGS10O43665 173 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 PTP4A3O75365 173 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 F13BP05160 661 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 GYPBP06028 91 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 PEPDP12955 493 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 GP1BBP13224 206 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 PCMT1P22061 227 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 CTBP2P56545 445 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 GPR85P60893 370 aa12.65□□□□□ -0.39
SMPD4-219ENST00000491128 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.39
SMPD4-219ENST00000491128 ZNF791Q3KP31 576 aaPredicted RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms