RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 KIRREL2Q6UWL6 708 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 NPSR1Q6W5P4 371 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 Q6ZS52 159 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 TMPRSS11FQ6ZWK6 438 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 PARGQ86W56 976 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 OR4C3Q8NH37 302 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 ABHD4Q8TB40 342 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 SNAPC3Q92966 411 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 ZFP3Q96NJ6 502 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 ERMAPQ96PL5 475 aaPredicted RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 KCNJ15Q99712 375 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 KLHDC3Q9BQ90 382 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 THAP7Q9BT49 309 aaPredicted RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 GPR174Q9BXC1 333 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 ABCG5Q9H222 651 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 ASB6Q9NWX5 421 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 DNAJB12Q9NXW2 375 aaKnown RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 CYP8B1Q9UNU6 501 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 A0A087WV62 115 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 A0A0J9YY10 115 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 SLC9B1P1A6NJY1 282 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 IDSB3KWA1 339 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 MCIDASD6RGH6 385 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 GMFGO60234 142 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 HOXC4P09017 264 aaPredicted RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 SNRPBP14678 240 aaKnown RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 HIST1H1CP16403 213 aaKnown RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 DRD5P21918 477 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 GRPRP30550 384 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 THBS2P35442 1172 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 MAZP56270 477 aaKnown RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 CLDN20P56880 219 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 UBE2IP63279 158 aaKnown RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 ADAM15Q13444 863 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 ZNF267Q14586 743 aaPredicted RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 ALG10BQ5I7T1 473 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 FAM205BPQ63HN1 556 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 MZT2AQ6P582 158 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 TRILQ7L0X0 811 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 PRSS45Q7RTY3 260 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 GID4Q8IVV7 300 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 SAMD14Q8IZD0 417 aaPredicted RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 RCBTB1Q8NDN9 531 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 BEST4Q8NFU0 473 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 OR4C6Q8NH72 309 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 DEDD2Q8WXF8 326 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 HSD17B8Q92506 261 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 GHSRQ92847 366 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 KIAA1143Q96AT1 154 aaPredicted RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 MRPL38Q96DV4 380 aaKnown RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 CLIP3Q96DZ5 547 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 ERVMER34-1Q9H9K5 563 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 FOLH1BQ9HBA9 442 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 TMEM27Q9HBJ8 222 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 ACOXLQ9NUZ1 547 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 NUDT15Q9NV35 164 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 MRPL15Q9P015 296 aaKnown RBP9.95□□□□□ -0.82
VPS52-217ENST00000478934 CD207Q9UJ71 328 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 PCDHGB7Q9Y5F8 929 aa9.95□□□□□ -0.82
VPS52-217ENST00000478934 A0A0A6YYJ9 748 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 FAM86C2PA6NEL3 165 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 C17orf51A8MQB3 221 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 H3BSH0 61 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 RCBTB2O95199 551 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 SEMA4FO95754 770 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 HLA-DQB1P01920 261 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 ZNF10P21506 573 aaPredicted RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 SLC2A5P22732 501 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 MAOBP27338 520 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 PSMB10P40306 273 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 SFXN4Q6P4A7 337 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 RNF44Q7L0R7 432 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 CDK20Q8IZL9 346 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 GALNT6Q8NCL4 622 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 DUSP18Q8NEJ0 188 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 TRMT10AQ8TBZ6 339 aaKnown RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 PCNPQ8WW12 178 aaKnown RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 ZNF524Q96C55 264 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 MS4A3Q96HJ5 214 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 TWSG1Q9GZX9 223 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 IRF2BPLQ9H1B7 796 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 KRCC1Q9NPI7 259 aaPredicted RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 SATB2Q9UPW6 733 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 IER3IP1Q9Y5U9 82 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 VPS13AQ96RL7 3174 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 RIIAD1A6NNX1 92 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 ZNF780AO75290 641 aaPredicted RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 NKX2-2O95096 273 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 TNFP01375 233 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 HLA-DMAP28067 261 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 AKT2P31751 481 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 RRAS2P62070 204 aaPredicted RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 HHEXQ03014 270 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 SF3A2Q15428 464 aaKnown RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 FCN2Q15485 313 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 OTPQ5XKR4 325 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 LAMTOR1Q6IAA8 161 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 TMEM184AQ6ZMB5 413 aa9.94□□□□□ -0.82
VPS52-217ENST00000478934 RNF113BQ8IZP6 322 aaKnown RBP9.94□□□□□ -0.82
VPS52-217ENST00000478934 SLC44A3Q8N4M1 653 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms