RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 IFT27Q9BW83 186 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 MMP25Q9NPA2 562 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 FARSAQ9Y285 508 aaKnown RBP16.53■□□□□ 0.24
SMC4-211ENST00000469858 RPL36Q9Y3U8 105 aaKnown RBP16.53■□□□□ 0.24
SMC4-211ENST00000469858 MASP2O00187 686 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 BHLHE40O14503 412 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 PTP4A3O75365 173 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 ITGA10O75578 1167 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 SLC2A10O95528 541 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 HMGN1P05114 100 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 DBTP11182 482 aaKnown RBP16.53■□□□□ 0.24
SMC4-211ENST00000469858 CCNA2P20248 432 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 COL28A1Q2UY09 1125 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 BICRALQ6AI39 1079 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 PPP1R32Q7Z5V6 425 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 LRRC17Q8N6Y2 441 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 TTC9Q92623 222 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 ISOC1Q96CN7 298 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 TMEM43Q9BTV4 400 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 SLC19A3Q9BZV2 496 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 ADAM19Q9H013 955 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 MCCC2Q9HCC0 563 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 KLRF1Q9NZS2 232 aa16.53■□□□□ 0.24
SMC4-211ENST00000469858 WARS2Q9UGM6 360 aaKnown RBP16.53■□□□□ 0.24
SMC4-211ENST00000469858 LCKP06239 509 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 FBXO45P0C2W1 286 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 GP1BBP13224 206 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 PSMB9P28065 219 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 RPS15P62841 145 aaKnown RBP16.52■□□□□ 0.24
SMC4-211ENST00000469858 TUBA3CQ13748 450 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 QPRTQ15274 297 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 FCRLBQ6BAA4 426 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 ESX1Q8N693 406 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 SPACA9Q96E40 222 aaPredicted RBP16.52■□□□□ 0.24
SMC4-211ENST00000469858 PRRX2Q99811 253 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 COL25A1Q9BXS0 654 aaPredicted RBP16.52■□□□□ 0.24
SMC4-211ENST00000469858 TAS2R16Q9NYV7 291 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 COMMD3-BMI1R4GMX3 469 aa16.52■□□□□ 0.24
SMC4-211ENST00000469858 CPAMD8Q8IZJ3 1885 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 SPAARA0A1B0GVQ0 90 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 CDC40O60508 579 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMC4-211ENST00000469858 TNFSF15O95150 251 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 ADRA2AP08913 450 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 PIPP12273 146 aaPredicted RBP16.51■□□□□ 0.23
SMC4-211ENST00000469858 SOX3P41225 446 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 C17orf67Q0P5P2 114 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 FHL1Q13642 323 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 TBCEQ15813 527 aaPredicted RBP16.51■□□□□ 0.23
SMC4-211ENST00000469858 SLC35F1Q5T1Q4 408 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 SLC46A3Q7Z3Q1 461 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 LNX2Q8N448 690 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 ANKK1Q8NFD2 765 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 GPR119Q8TDV5 335 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 NAA50Q9GZZ1 169 aaKnown RBP16.51■□□□□ 0.23
SMC4-211ENST00000469858 C12orf10Q9HB07 376 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 MED17Q9NVC6 651 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 OSGIN1Q9UJX0 560 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 A0A1W2PQ72 361 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 PRODHO43272 600 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 OR7A10O76100 309 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 PPP1R3DO95685 299 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 FTH1P19P0C7X4 201 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 CDK4P11802 303 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 CXCR1P25024 350 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 DCKP27707 260 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 GRK5P34947 590 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 EGR4Q05215 589 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 SSPNQ14714 243 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 NTRK2Q16620 822 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 RTL4Q6ZR62 310 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 SLC15A4Q8N697 577 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 C10orf53Q8N6V4 93 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 CXorf56Q9H5V9 222 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 METTL7AQ9H8H3 244 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 TAS2R10Q9NYW0 307 aa16.51■□□□□ 0.23
SMC4-211ENST00000469858 EML6Q6ZMW3 1958 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 KDM4EB2RXH2 506 aaPredicted RBP16.5■□□□□ 0.23
SMC4-211ENST00000469858 DKK1O94907 266 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 WISP1O95388 367 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 GSTT1P30711 240 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 SLC6A6P31641 620 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 SLC9A3P48764 834 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 GAS1P54826 345 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 DNASE1L3Q13609 305 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 GXYLT1Q4G148 440 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 NLGN4YQ8NFZ3 816 aaPredicted RBP16.5■□□□□ 0.23
SMC4-211ENST00000469858 RNF138Q8WVD3 245 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 OTULINQ96BN8 352 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.5■□□□□ 0.23
SMC4-211ENST00000469858 ZNF337Q9Y3M9 751 aa16.5■□□□□ 0.23
SMC4-211ENST00000469858 FAM183AA6NL82 134 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 B4DXG7 233 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 DLSTP36957 453 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 NBL1P41271 181 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 FOXK2Q01167 660 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 ZNF74Q16587 644 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 SYT6Q5T7P8 510 aaPredicted RBP16.49■□□□□ 0.23
SMC4-211ENST00000469858 IGFN1Q86VF2 1251 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 FCGR1BQ92637 280 aa16.49■□□□□ 0.23
SMC4-211ENST00000469858 C12orf43Q96C57 262 aaKnown RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms