RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 TUBA1BP68363 451 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 DAB2P98082 770 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 EGR4Q05215 589 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 ITGADQ13349 1161 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 RTL4Q6ZR62 310 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 TUBA1AQ71U36 451 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 MEPCEQ7L2J0 689 aaKnown RBP11.71□□□□□ -0.54
VAPB-203ENST00000463370 SLC29A4Q7RTT9 530 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 TMEM99Q8N816 258 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 PMEPA1Q969W9 287 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 DNAJA3Q96EY1 480 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 TBX5Q99593 518 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 TIMP4Q99727 224 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 FN3KQ9H479 309 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 FBXO8Q9NRD0 319 aa11.71□□□□□ -0.54
VAPB-203ENST00000463370 H2AFY2Q9P0M6 372 aaPredicted RBP11.71□□□□□ -0.54
VAPB-203ENST00000463370 EXOSC1Q9Y3B2 195 aaKnown RBP11.71□□□□□ -0.54
VAPB-203ENST00000463370 ASCC3Q8N3C0 2202 aaKnown RBP11.71□□□□□ -0.54
VAPB-203ENST00000463370 C4orf47A7E2U8 309 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 CLDN25C9JDP6 229 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 TO15178 435 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 MAGEB3O15480 346 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 HCRTR2O43614 444 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 HEXBP07686 556 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 MRPL3P09001 348 aaKnown RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 HIST1H1CP16403 213 aaKnown RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 CPEP16870 476 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 ATP6V1E1P36543 226 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 TGM4P49221 684 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 DCAF7P61962 342 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 RPS25P62851 125 aaKnown RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 DCDP81605 110 aaKnown RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 ZNF404Q494X3 552 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 WBP2NLQ6ICG8 309 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 C16orf87Q6PH81 154 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 GHDCQ8N2G8 530 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 NFAM1Q8NET5 270 aaPredicted RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 KBTBD8Q8NFY9 601 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 C8orf44Q96CB5 159 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 ART5Q96L15 291 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 MOGAT1Q96PD6 335 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 ERMAPQ96PL5 475 aaPredicted RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 DEPDC7Q96QD5 511 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 TM9SF2Q99805 663 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 ARHGAP9Q9BRR9 750 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 ISG20L2Q9H9L3 353 aaKnown RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 CHCHD3Q9NX63 227 aaKnown RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 ERVK13-1Q9NX77 482 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 TNFRSF10DQ9UBN6 386 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 CHRNA9Q9UGM1 479 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 HEATR5AQ86XA9 2040 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 NUP210LQ5VU65 1888 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 FAM86C2PA6NEL3 165 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 PRR23D1E9PI22 279 aaPredicted RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 PLD2O14939 933 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 PRR23D2P0DMB1 279 aaPredicted RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 PEPDP12955 493 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 ZNF28P17035 718 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 SLC2A5P22732 501 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 PSMA1P25786 263 aaKnown RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 SLC16A1P53985 500 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 RNF4P78317 190 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 CROCCP3Q8IVE0 287 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 ZNF440Q8IYI8 595 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 SDR9C7Q8NEX9 313 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 OR9Q1Q8NGQ5 310 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 OR4K13Q8NH42 304 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 MOSPD2Q8NHP6 518 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 DACH2Q96NX9 599 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 DCLRE1CQ96SD1 692 aaKnown RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 SPSB2Q99619 263 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 WDR77Q9BQA1 342 aaPredicted RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 C6orf62Q9GZU0 229 aaPredicted RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 EXOSC3Q9NQT5 275 aaKnown RBP11.7□□□□□ -0.54
VAPB-203ENST00000463370 QPCTLQ9NXS2 382 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 STUB1Q9UNE7 303 aa11.7□□□□□ -0.54
VAPB-203ENST00000463370 IRGMA1A4Y4 181 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 ELOA3DA6NLF2 546 aaPredicted RBP11.69□□□□□ -0.54
VAPB-203ENST00000463370 C12orf71A8MTZ7 269 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 D6RAR5 112 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 ADAM10O14672 748 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 ALOX12BO75342 701 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 TACR3P29371 465 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 SLC6A6P31641 620 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 RPS19P39019 145 aaKnown RBP11.69□□□□□ -0.54
VAPB-203ENST00000463370 IFITM3Q01628 133 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 LTBQ06643 244 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 TMEM44Q2T9K0 475 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 ELOA3BQ3SY89 546 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 TIMM50Q3ZCQ8 353 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 POMZP3Q6PJE2 187 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 PPP1R3BQ86XI6 285 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 GID4Q8IVV7 300 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 ELOA3Q8NG57 546 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 OR52E2Q8NGJ4 325 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 ZPLD1Q8TCW7 415 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
VAPB-203ENST00000463370 ZNRF4Q8WWF5 429 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 RELTQ969Z4 430 aa11.69□□□□□ -0.54
VAPB-203ENST00000463370 GFM1Q96RP9 751 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms