RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 OPN1LWP04000 364 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 TPOP07202 933 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 PEPDP12955 493 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF708P17019 499 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 POU3F2P20265 443 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-202ENST00000451053 GNLYP22749 145 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 ELK4P28324 431 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 ADH6P28332 368 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 SHC1P29353 583 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 TACR3P29371 465 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 SLC1A3P43003 542 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 ARHGDIAP52565 204 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 CLDN18P56856 261 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 COPZ1P61923 177 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 RBPJQ06330 500 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 EMC4Q5J8M3 183 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 DEF8Q6ZN54 512 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 GRINAQ7Z429 371 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF605Q86T29 641 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 CD163Q86VB7 1156 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 TSPYL5Q86VY4 417 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-202ENST00000451053 UBQLNLQ8IYU4 475 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 FAM57AQ8TBR7 257 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 SMPDL3BQ92485 455 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 RELTQ969Z4 430 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 C3orf49Q96BT1 292 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 SDCCAG3Q96C92 435 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 WDYHV1Q96HA8 205 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 PRRC1Q96M27 445 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 MCHR1Q99705 422 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 ZNF559Q9BR84 538 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 ADAM19Q9H013 955 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 C8orf4Q9NR00 106 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 PNPLA3Q9NST1 481 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 NKX1-2Q9UD57 310 aaPredicted RBP11.75□□□□□ -0.53
VPS33A-202ENST00000451053 OSGIN1Q9UJX0 560 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 ACAD8Q9UKU7 415 aa11.75□□□□□ -0.53
VPS33A-202ENST00000451053 A0A1B0GWA3 101 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 CPSF4LA6NMK7 179 aaKnown RBP11.74□□□□□ -0.53
VPS33A-202ENST00000451053 H0YC42 278 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 LINC01387J3KSC0 135 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 BCKDKO14874 412 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 CASQ2O14958 399 aaPredicted RBP11.74□□□□□ -0.53
VPS33A-202ENST00000451053 SEC14L5O43304 696 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 PRSS23O95084 383 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 OR5F1O95221 314 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 THRBP10828 461 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 CCNA2P20248 432 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 APOBEC1P41238 236 aaKnown RBP11.74□□□□□ -0.53
VPS33A-202ENST00000451053 HTR3AP46098 478 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 POLR2HP52434 150 aaKnown RBP11.74□□□□□ -0.53
VPS33A-202ENST00000451053 SUCLG1P53597 346 aaKnown RBP11.74□□□□□ -0.53
VPS33A-202ENST00000451053 TPD52P55327 224 aaPredicted RBP11.74□□□□□ -0.53
VPS33A-202ENST00000451053 CLDN15P56746 228 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 CLDN20P56880 219 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 TAS2R41P59536 307 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 SPIBQ01892 262 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 SRYQ05066 204 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 OR1Q1Q15612 314 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 TRIP10Q15642 601 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 GXYLT1Q4G148 440 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 IQCCQ4KMZ1 466 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 ENTPD8Q5MY95 495 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 Q6ZPB1 254 aaPredicted RBP11.74□□□□□ -0.53
VPS33A-202ENST00000451053 AMIGO2Q86SJ2 522 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 ATCAYQ86WG3 371 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 ADGRG3Q86Y34 549 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 LILRA2Q8N149 483 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 SVOPLQ8N434 492 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 LSMEM1Q8N8F7 131 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 PIK3C3Q8NEB9 887 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 ATP6V1C2Q8NEY4 427 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 PHF10Q8WUB8 498 aaKnown RBP11.74□□□□□ -0.53
VPS33A-202ENST00000451053 EME1Q96AY2 570 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 NRBF2Q96F24 287 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 EPYCQ99645 322 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 C9orf16Q9BUW7 83 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 FNDC11Q9BVV2 318 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 OSBPL10Q9BXB5 764 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 TRIM2Q9C040 744 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 PRDM14Q9GZV8 571 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 SEMA6AQ9H2E6 1030 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 VCXQ9H320 206 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 ANKRD19PQ9H560 264 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 TMEM27Q9HBJ8 222 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 RPS6KB2Q9UBS0 482 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 TINAGQ9UJW2 476 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 CAMK2AQ9UQM7 478 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 OSGIN2Q9Y236 505 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 AP4B1Q9Y6B7 739 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 CHD6Q8TD26 2715 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 MED12Q93074 2177 aa11.74□□□□□ -0.53
VPS33A-202ENST00000451053 TMED7-TICAM2A0A0A6YYA0 188 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 A0A0B4J2E0 115 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 A0A1B0GX12 115 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 TMEM72A0PK05 275 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 SEMA7AO75326 666 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 GADD45GO95257 159 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 SVILO95425 2214 aa11.73□□□□□ -0.53
VPS33A-202ENST00000451053 H1F0P07305 194 aaKnown RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms