RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 OR7D2Q96RA2 312 aa8.79□□□□□ -1
MDC1-202ENST00000416571 PRPF18Q99633 342 aaKnown RBP8.79□□□□□ -1
MDC1-202ENST00000416571 VRK1Q99986 396 aaPredicted RBP8.79□□□□□ -1
MDC1-202ENST00000416571 KCNS3Q9BQ31 491 aa8.79□□□□□ -1
MDC1-202ENST00000416571 PRR14Q9BWN1 585 aa8.79□□□□□ -1
MDC1-202ENST00000416571 NMUR2Q9GZQ4 415 aa8.79□□□□□ -1
MDC1-202ENST00000416571 C12orf65Q9H3J6 166 aaKnown RBP8.79□□□□□ -1
MDC1-202ENST00000416571 PARPBPQ9NWS1 579 aa8.79□□□□□ -1
MDC1-202ENST00000416571 OXSMQ9NWU1 459 aa8.79□□□□□ -1
MDC1-202ENST00000416571 CHRNA9Q9UGM1 479 aa8.79□□□□□ -1
MDC1-202ENST00000416571 ATP6V1HQ9UI12 483 aa8.79□□□□□ -1
MDC1-202ENST00000416571 IGHV4-61A0A0C4DH41 118 aa8.78□□□□□ -1
MDC1-202ENST00000416571 DUXAA6NLW8 204 aa8.78□□□□□ -1
MDC1-202ENST00000416571 ESPNB1AK53 854 aa8.78□□□□□ -1
MDC1-202ENST00000416571 ANKRD28O15084 1053 aa8.78□□□□□ -1
MDC1-202ENST00000416571 RIPK2O43353 540 aa8.78□□□□□ -1
MDC1-202ENST00000416571 DNPH1O43598 174 aa8.78□□□□□ -1
MDC1-202ENST00000416571 PLIN3O60664 434 aa8.78□□□□□ -1
MDC1-202ENST00000416571 STX11O75558 287 aa8.78□□□□□ -1
MDC1-202ENST00000416571 PMS2P2O95744 297 aa8.78□□□□□ -1
MDC1-202ENST00000416571 C6orf47O95873 294 aa8.78□□□□□ -1
MDC1-202ENST00000416571 AK1P00568 194 aa8.78□□□□□ -1
MDC1-202ENST00000416571 ITGA5P08648 1049 aa8.78□□□□□ -1
MDC1-202ENST00000416571 LAMP1P11279 417 aa8.78□□□□□ -1
MDC1-202ENST00000416571 CPA3P15088 417 aa8.78□□□□□ -1
MDC1-202ENST00000416571 FKBP2P26885 142 aaKnown RBP8.78□□□□□ -1
MDC1-202ENST00000416571 SRP14P37108 136 aaKnown RBP8.78□□□□□ -1
MDC1-202ENST00000416571 APOBEC1P41238 236 aaKnown RBP8.78□□□□□ -1
MDC1-202ENST00000416571 FOXG1P55316 489 aaPredicted RBP8.78□□□□□ -1
MDC1-202ENST00000416571 OR2B6P58173 313 aa8.78□□□□□ -1
MDC1-202ENST00000416571 PRPS1P60891 318 aa8.78□□□□□ -1
MDC1-202ENST00000416571 WHAMMP3Q1A5X7 153 aa8.78□□□□□ -1
MDC1-202ENST00000416571 CR1LQ2VPA4 569 aa8.78□□□□□ -1
MDC1-202ENST00000416571 RNF165Q6ZSG1 346 aa8.78□□□□□ -1
MDC1-202ENST00000416571 C17orf53Q8N3J3 647 aaPredicted RBP8.78□□□□□ -1
MDC1-202ENST00000416571 C1orf162Q8NEQ5 155 aaPredicted RBP8.78□□□□□ -1
MDC1-202ENST00000416571 OR52E4Q8NGH9 312 aa8.78□□□□□ -1
MDC1-202ENST00000416571 OR5AK3PQ8NH89 298 aa8.78□□□□□ -1
MDC1-202ENST00000416571 FOXN4Q96NZ1 517 aa8.78□□□□□ -1
MDC1-202ENST00000416571 SORCS2Q96PQ0 1159 aa8.78□□□□□ -1
MDC1-202ENST00000416571 SDF2Q99470 211 aa8.78□□□□□ -1
MDC1-202ENST00000416571 SLC17A5Q9NRA2 495 aa8.78□□□□□ -1
MDC1-202ENST00000416571 ACER3Q9NUN7 267 aa8.78□□□□□ -1
MDC1-202ENST00000416571 GPATCH2Q9NW75 528 aa8.78□□□□□ -1
MDC1-202ENST00000416571 MID2Q9UJV3 735 aa8.78□□□□□ -1
MDC1-202ENST00000416571 DCTN4Q9UJW0 460 aa8.78□□□□□ -1
MDC1-202ENST00000416571 MOKQ9UQ07 419 aa8.78□□□□□ -1
MDC1-202ENST00000416571 SLC9A8Q9Y2E8 581 aa8.78□□□□□ -1
MDC1-202ENST00000416571 HDGFL3Q9Y3E1 203 aa8.78□□□□□ -1
MDC1-202ENST00000416571 DNAJC15Q9Y5T4 150 aa8.78□□□□□ -1
MDC1-202ENST00000416571 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.78□□□□□ -1
MDC1-202ENST00000416571 A0A1W2PPM1 405 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 COPEO14579 308 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 LYPLA1O75608 230 aaPredicted RBP8.77□□□□□ -1.01
MDC1-202ENST00000416571 UGT2B17O75795 530 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 ZNF23P17027 643 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 CCNA2P20248 432 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 MATN1P21941 496 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 RYKP34925 604 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 CLK1P49759 484 aaKnown RBP8.77□□□□□ -1.01
MDC1-202ENST00000416571 SLC16A1P53985 500 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 RPS26P62854 115 aaKnown RBP8.77□□□□□ -1.01
MDC1-202ENST00000416571 ZNF141Q15928 474 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 SWI5Q1ZZU3 235 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 C1QTNF12Q5T7M4 302 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 KANK2Q63ZY3 851 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 C12orf54Q6X4T0 127 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 C16orf62Q7Z3J2 963 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 GRINAQ7Z429 371 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 CCDC103Q8IW40 242 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 ANKS4BQ8N8V4 417 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 NOA1Q8NC60 698 aaKnown RBP8.77□□□□□ -1.01
MDC1-202ENST00000416571 MNS1Q8NEH6 495 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 PSMA8Q8TAA3 256 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 TWIST2Q8WVJ9 160 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 ARL5BQ96KC2 179 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 PPP3R2Q96LZ3 170 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 NAA11Q9BSU3 229 aaPredicted RBP8.77□□□□□ -1.01
MDC1-202ENST00000416571 BPESC1Q9GZL8 116 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 TUBB1Q9H4B7 451 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 CTPS2Q9NRF8 586 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 EXD2Q9NVH0 621 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 MKLN1Q9UL63 735 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 SLC35A3Q9Y2D2 325 aa8.77□□□□□ -1.01
MDC1-202ENST00000416571 MEGF8Q7Z7M0 2845 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 ARFGEF3Q5TH69 2177 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 B9A039 149 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 EIF1BO60739 113 aaKnown RBP8.76□□□□□ -1.01
MDC1-202ENST00000416571 DNAJA2O60884 412 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 PEX11AO75192 247 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 KRT33AO76009 404 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 SNUPNO95149 360 aaKnown RBP8.76□□□□□ -1.01
MDC1-202ENST00000416571 CRYAAP02489 173 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 ERCC1P07992 297 aaPredicted RBP8.76□□□□□ -1.01
MDC1-202ENST00000416571 ITGA2P17301 1181 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 CDH2P19022 906 aaPredicted RBP8.76□□□□□ -1.01
MDC1-202ENST00000416571 MPGP29372 298 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 CRHR1P34998 444 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 SERPINF1P36955 418 aa8.76□□□□□ -1.01
MDC1-202ENST00000416571 SLC35A1P78382 337 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms