RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 KLHL36Q8N4N3 616 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 TMEM102Q8N9M5 508 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 OR51A7Q8NH64 312 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 TMEM239Q8WW34 195 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ISOC1Q96CN7 298 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 SLC41A2Q96JW4 573 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 DCBLD2Q96PD2 775 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 NEDD4LQ96PU5 975 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 IL4I1Q96RQ9 567 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 DSN1Q9H410 356 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 RXFP3Q9NSD7 469 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 C2orf42Q9NWW7 574 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 NKIRAS2Q9NYR9 191 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 FMO6PO60774 539 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 CRTAPO75718 401 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 CLPXO76031 633 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 INMTO95050 263 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 FARS2O95363 451 aaKnown RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ATP1B1P05026 303 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 RORCP51449 518 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 CRISP1P54107 249 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 C21orf58P58505 322 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 CSNK2A1P68400 391 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ARHGAP11BQ3KRB8 267 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 FAM122CQ6P4D5 195 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 VRK2Q86Y07 508 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 EGFL6Q8IUX8 553 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 OR7G2Q8NG99 324 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 TMEM80Q96HE8 168 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 THOC3Q96J01 351 aaKnown RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 FEVQ99581 238 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 SARGQ9BW04 601 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 PRO3102Q9H379 93 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 TMEM74BQ9NUR3 256 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF318Q5VUA4 2279 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 DAPL1A0PJW8 107 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 FAM172BPA6NC97 362 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 SOX14O95416 240 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 THBS1P07996 1170 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 G0S2P27469 103 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 EIF1P41567 113 aaKnown RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 GCGRP47871 477 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 DUSP5Q16690 384 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 MICAQ29983 383 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 PRTGQ2VWP7 1150 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 C19orf35Q6ZS72 473 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 GPAT4Q86UL3 456 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 NRMQ8IXM6 262 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 CCDC54Q8NEL0 328 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 OR10H4Q8NGA5 316 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 OR1J4Q8NGS1 313 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 SGCZQ96LD1 299 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 CSF3RQ99062 836 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 CHCHD6Q9BRQ6 235 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 PRAMEF25A6NGN4 478 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 TLX2O43763 284 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 NDUFB2O95178 105 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 GDF1P27539 372 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 KCNJ5P48544 419 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 CDH11P55287 796 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 TAS2R43P59537 309 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 SCN1BQ07699 218 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 LSAMPQ13449 338 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 PRSS48Q7RTY5 328 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF554Q86TJ5 538 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 RNF113BQ8IZP6 322 aaKnown RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ZADH2Q8N4Q0 377 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 GOT1L1Q8NHS2 421 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ERMAPQ96PL5 475 aaPredicted RBP7.89□□□□□ -1.15
SYNE1-211ENST00000413186 GPR87Q9BY21 358 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 MMP27Q9H306 513 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF160Q9HCG1 818 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 BCL2L10Q9HD36 194 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 TBCCD1Q9NVR7 557 aa7.89□□□□□ -1.15
SYNE1-211ENST00000413186 RP1L1Q8IWN7 2480 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-211ENST00000413186 NOTOA8MTQ0 251 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 CYC1P08574 325 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 ANKRD34CP0C6C1 535 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 FKBP2P26885 142 aaKnown RBP7.88□□□□□ -1.15
SYNE1-211ENST00000413186 RNF144AP50876 292 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-211ENST00000413186 ZNF84P51523 738 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 RAB39AQ14964 217 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 COX20Q5RI15 118 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 NDUFAF7Q7L592 441 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 KANSL1Q7Z3B3 1105 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 KLHL15Q96M94 604 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 CDCP1Q9H5V8 836 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 NMNAT1Q9HAN9 279 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-211ENST00000413186 ELL3Q9HB65 397 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-211ENST00000413186 TREM1Q9NP99 234 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 TNFRSF10DQ9UBN6 386 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 SLC7A7Q9UM01 511 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 VDAC3Q9Y277 283 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 IGHV3-20A0A0C4DH32 117 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 RPS10-NUDT3A0A1W2PQS6 291 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 ANGPTL7O43827 346 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 NUDT3O95989 172 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 LAPTM4AQ15012 233 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 PWWP2BQ6NUJ5 590 aa7.88□□□□□ -1.15
SYNE1-211ENST00000413186 RIMKLAQ8IXN7 391 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms