RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 THBS2P35442 1172 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 RPS26P62854 115 aaKnown RBP14.68□□□□□ -0.06
MRPL55-220ENST00000411464 HBA1P69905 142 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 LSM11P83369 360 aaKnown RBP eCLIP14.68□□□□□ -0.06
MRPL55-220ENST00000411464 GABRA6Q16445 453 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 IL23RQ5VWK5 629 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 C6orf120Q7Z4R8 191 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 FNDC5Q8NAU1 212 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 ZNF563Q8TA94 476 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 AGR3Q8TD06 166 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 DUSP26Q9BV47 211 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 BHLHE41Q9C0J9 482 aaPredicted RBP14.68□□□□□ -0.06
MRPL55-220ENST00000411464 PPCSQ9HAB8 311 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 MALT1Q9UDY8 824 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 CHRNA9Q9UGM1 479 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 KCNE5Q9UJ90 142 aa14.68□□□□□ -0.06
MRPL55-220ENST00000411464 CUBNO60494 3623 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 HAX1O00165 279 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 ZNF500O60304 480 aaPredicted RBP14.67□□□□□ -0.06
MRPL55-220ENST00000411464 NPHS1O60500 1241 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 UGT2B17O75795 530 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 PMS2P2O95744 297 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 ZNF16P17020 682 aaPredicted RBP14.67□□□□□ -0.06
MRPL55-220ENST00000411464 SRD5A1P18405 259 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 APOBEC3AP31941 199 aaPredicted RBP14.67□□□□□ -0.06
MRPL55-220ENST00000411464 RYKP34925 604 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 MAGEA8P43361 318 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 GZMKP49863 264 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 PGS1Q32NB8 556 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 ARHGAP11BQ3KRB8 267 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 C6orf136Q5SQH8 315 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 C16orf62Q7Z3J2 963 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 CCDC106Q9BWC9 280 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 CTPS2Q9NRF8 586 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 EXD2Q9NVH0 621 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 PARPBPQ9NWS1 579 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 UPB1Q9UBR1 384 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 KCNS2Q9ULS6 477 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 HDGFL3Q9Y3E1 203 aa14.67□□□□□ -0.06
MRPL55-220ENST00000411464 FREM1Q5H8C1 2179 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 ALPK2Q86TB3 2170 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 DNPH1O43598 174 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 ALDH3A1P30838 453 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 NTF4P34130 210 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 CLK1P49759 484 aaKnown RBP14.66□□□□□ -0.06
MRPL55-220ENST00000411464 SLC16A1P53985 500 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 FOXG1P55316 489 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-220ENST00000411464 OR2B6P58173 313 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 TGFBR3Q03167 851 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 XKR7Q5GH72 579 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 FAM166AQ6J272 317 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 CASP12Q6UXS9 341 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 CCDC103Q8IW40 242 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 RIMKLAQ8IXN7 391 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 ARIH2OSQ8N7S6 290 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 WDR31Q8NA23 367 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 OR52E4Q8NGH9 312 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 UBLCP1Q8WVY7 318 aaPredicted RBP14.66□□□□□ -0.06
MRPL55-220ENST00000411464 DNAJA3Q96EY1 480 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 ARL5BQ96KC2 179 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 C3orf30Q96M34 536 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 RHOXF2Q9BQY4 288 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 C19orf24Q9BVV8 132 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 SLC35A3Q9Y2D2 325 aa14.66□□□□□ -0.06
MRPL55-220ENST00000411464 CENPVL1A0A0U1RR11 272 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 LOC100289279A0A1B0GTE1 492 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 AGR2O95994 175 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 ITGA5P08648 1049 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 PGM1P36871 562 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 PHC1P78364 1004 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 GGTLC2Q14390 218 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 ATAD3BQ5T9A4 648 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 C9orf135Q5VTT2 229 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 OLIG3Q7RTU3 272 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 GRINAQ7Z429 371 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 C17orf78Q8N4C9 275 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 C1orf162Q8NEQ5 155 aaPredicted RBP14.65□□□□□ -0.06
MRPL55-220ENST00000411464 OIT3Q8WWZ8 545 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 SLC35G5Q96KT7 338 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 OR11A1Q9GZK7 315 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 ZNF350Q9GZX5 532 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 SERHL2Q9H4I8 314 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 CHODLQ9H9P2 273 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 DCTN4Q9UJW0 460 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 PCDHGB4Q9UN71 923 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 TRAPPC4Q9Y296 219 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 AMDHD2Q9Y303 409 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 WDR45Q9Y484 360 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 FKBP7Q9Y680 259 aa14.65□□□□□ -0.06
MRPL55-220ENST00000411464 RNF103-CHMP3A0A140T963 221 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 EIF1BO60739 113 aaKnown RBP14.64□□□□□ -0.07
MRPL55-220ENST00000411464 LY6HO94772 140 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 CCNA2P20248 432 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 HNF1AP20823 631 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 PDLIM4P50479 330 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 PRPS1P60891 318 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 MAPK14Q16539 360 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 C1QTNF12Q5T7M4 302 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 KLHL24Q6TFL4 600 aa14.64□□□□□ -0.07
MRPL55-220ENST00000411464 ADGRG3Q86Y34 549 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms