RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 FAM83HQ6ZRV2 1179 aaPredicted RBP14□□□□□ -0.17
NPHP4-201ENST00000378156 OR1E3Q8WZA6 343 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 EDAQ92838 391 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF419Q96HQ0 510 aaPredicted RBP14□□□□□ -0.17
NPHP4-201ENST00000378156 OR51J1Q9H342 316 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 TVP23AA6NH52 213 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 IFNA10P01566 189 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 AMY2BP19961 511 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 CRABP1P29762 137 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 CAV3P56539 151 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 TP53I3Q53FA7 332 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 C18orf63Q68DL7 685 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 FAM111BQ6SJ93 734 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 BCDIN3DQ7Z5W3 292 aaKnown RBP14□□□□□ -0.17
NPHP4-201ENST00000378156 EID2Q8N6I1 236 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 PDXPQ96GD0 296 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 KLHL15Q96M94 604 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 SFXN2Q96NB2 322 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 HIF3AQ9Y2N7 669 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 CACNG2Q9Y698 323 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 GFYI3L273 518 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 ZFAND5O76080 213 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 TGM6O95932 706 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 MAS1P04201 325 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 ADPRHP54922 357 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 DCAF7P61962 342 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 NKX3-2P78367 333 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 DPTQ07507 201 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 Q6ZNB5 142 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 PXKQ7Z7A4 578 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 RIMKLAQ8IXN7 391 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 TMEM163Q8TC26 289 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 TM4SF18Q96CE8 201 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 OR5B2Q96R09 309 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 C1GALT1Q9NS00 363 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 QPCTLQ9NXS2 382 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 RPH3AQ9Y2J0 694 aaPredicted RBP14□□□□□ -0.17
NPHP4-201ENST00000378156 PLEKHM1Q9Y4G2 1056 aa14□□□□□ -0.17
NPHP4-201ENST00000378156 CDC14CA4D256 554 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 MEGF11A6BM72 1044 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 EEF1E1-BLOC1S5C9J1V9 151 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 F5H5P2 479 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 GYPBP06028 91 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 IL32P24001 234 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 CDK2P24941 298 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 MAT1AQ00266 395 aaKnown RBP13.99□□□□□ -0.17
NPHP4-201ENST00000378156 MLLT11Q13015 90 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-201ENST00000378156 TDHQ8IZJ6 230 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 AGBL5Q8NDL9 886 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 TRMT10AQ8TBZ6 339 aaKnown RBP13.99□□□□□ -0.17
NPHP4-201ENST00000378156 EVA1AQ9H8M9 152 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF225Q9UK10 706 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 ARPC5O15511 151 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 TSPAN15O95858 294 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 IFNA4P05014 189 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 DRD5P21918 477 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 CCR2P41597 374 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 SLC6A12P48065 614 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 RACK1P63244 317 aaKnown RBP13.99□□□□□ -0.17
NPHP4-201ENST00000378156 SLC35A2P78381 396 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 OR1Q1Q15612 314 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 RAB11BQ15907 218 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 ABHD17CQ6PCB6 329 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 FAM109AQ8N4B1 249 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 SDR9C7Q8NEX9 313 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 RLIMQ9NVW2 624 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 PCDHGA6Q9Y5G7 932 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 THSD7AQ9UPZ6 1657 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 DOCK1Q14185 1865 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 TMX2-CTNND1H3BSU7 103 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 SLC22A5O76082 557 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 FUCA1P04066 466 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 ZNF28P17035 718 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 EVI2BP34910 448 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 RPS5P46782 204 aaKnown RBP13.99□□□□□ -0.17
NPHP4-201ENST00000378156 STEAP3Q658P3 488 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 TMEM179BQ7Z7N9 219 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 FAM83FQ8NEG4 500 aaPredicted RBP13.99□□□□□ -0.17
NPHP4-201ENST00000378156 OR13C3Q8NGS6 347 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 MYADMQ96S97 322 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 RBM24Q9BX46 236 aaKnown RBP13.99□□□□□ -0.17
NPHP4-201ENST00000378156 MCM3APO60318 1980 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 FZD6O60353 706 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 CD63P08962 238 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 PTH2RP49190 550 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 GP2P55259 537 aaKnown RBP13.99□□□□□ -0.17
NPHP4-201ENST00000378156 ERVK-25P63136 954 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 KCNJ8Q15842 424 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 DUSP7Q16829 419 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 MRPL2Q5T653 305 aaKnown RBP13.99□□□□□ -0.17
NPHP4-201ENST00000378156 FAM71E1Q6IPT2 247 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 B3GLCTQ6Y288 498 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 OR5W2Q8NH69 310 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 OR5AK2Q8NH90 309 aa13.99□□□□□ -0.17
NPHP4-201ENST00000378156 SSX4O60224 188 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 HPGDSO60760 199 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 AMY2AP04746 511 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 OR8U9P0C7N5 309 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 SRYQ05066 204 aa13.98□□□□□ -0.17
NPHP4-201ENST00000378156 HOXB13Q92826 284 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms