RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 M0R3G1 203 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 PGCP20142 388 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 GADD45AP24522 165 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 RPS4XP62701 263 aaKnown RBP20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 TMED1Q13445 227 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 NIPAL3Q6P499 406 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ARHGAP11AQ6P4F7 1023 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 AMER2Q8N7J2 671 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 BBS1Q8NFJ9 593 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 RPL3LQ92901 407 aaKnown RBP20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 SH3YL1Q96HL8 342 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 JAM3Q9BX67 310 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ZBTB20Q9HC78 741 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 SLC39A1Q9NY26 324 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ADAM10O14672 748 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 NADKO95544 446 aaPredicted RBP20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 CDK4P11802 303 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 HK1P19367 917 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ETV5P41161 510 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ETV1P50549 477 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 P2RX1P51575 399 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 LIMK1P53667 647 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 CBFBQ13951 182 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 DOC2BQ14184 412 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ARMC4Q5T2S8 1044 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 NDNFQ8TB73 568 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 TBC1D15Q8TC07 691 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 PMEPA1Q969W9 287 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ZNF524Q96C55 264 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 C8orf44Q96CB5 159 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 PCDHGA3Q9Y5H0 932 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 R4GN57 208 aa20.53■□□□□ 0.88
TNFRSF10B-202ENST00000347739 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 RIIAD1A6NNX1 92 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 C9J4A7 227 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 CDC40O60508 579 aaKnown RBP eCLIP20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ZFAND5O76080 213 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 PPP1R3DO95685 299 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 CD59P13987 128 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 NCS1P62166 190 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 LSM3P62310 102 aaKnown RBP20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 MLLT11Q13015 90 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 TSTQ16762 297 aaKnown RBP20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 TIMM50Q3ZCQ8 353 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ZNF362Q5T0B9 420 aaPredicted RBP20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 SLC35F1Q5T1Q4 408 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 PLBD1Q6P4A8 553 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 ATCAYQ86WG3 371 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 DYNC2LI1Q8TCX1 351 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 MR1Q95460 341 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 KLHDC3Q9BQ90 382 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 SLC24A3Q9HC58 644 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 CHCHD3Q9NX63 227 aaKnown RBP20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 CHRNA9Q9UGM1 479 aa20.52■□□□□ 0.88
TNFRSF10B-202ENST00000347739 FAM183AA6NL82 134 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 PRR23D1E9PI22 279 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 SOCS6O14544 535 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 CDX4O14627 284 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 CLPXO76031 633 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 IGHA1P01876 353 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 PRR23D2P0DMB1 279 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 ZNF3P17036 446 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 TACR3P29371 465 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 UGT2B10P36537 528 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 CLK1P49759 484 aaKnown RBP20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 EGR4Q05215 589 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 SSX1Q16384 188 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 FAM199XQ6PEV8 388 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 PAQR6Q6TCH4 344 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 MEPCEQ7L2J0 689 aaKnown RBP20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 RNF138Q8WVD3 245 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 HGDQ93099 445 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 GPX7Q96SL4 187 aaPredicted RBP20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 WDR87Q6ZQQ6 2873 aa20.51■□□□□ 0.87
TNFRSF10B-202ENST00000347739 SCO2O43819 266 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 ZNF354AO60765 605 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 IFNGP01579 166 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 ITPKBP27987 946 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 WNT4P56705 351 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 RAB15P59190 212 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 PRPS1P60891 318 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 ZNF74Q16587 644 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 ANKDD1AQ495B1 522 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 DPY19L2P2Q6ZN68 376 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 C16orf47Q6ZP98 133 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 LRRC17Q8N6Y2 441 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 TMCO6Q96DC7 493 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 ISYNA1Q9NPH2 558 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 SLC22A31A6NKX4 558 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 LRRN3E7EW58 273 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 WWP2O00308 870 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 GALR2O43603 387 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 KLF7O75840 302 aaPredicted RBP20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 APOL3O95236 402 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 UMODP07911 640 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 LIMS3P0CW19 117 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 LIMS4P0CW20 117 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 TUBA1BP68363 451 aa20.5■□□□□ 0.87
TNFRSF10B-202ENST00000347739 ITGADQ13349 1161 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms