RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 ZNF544Q6NX49 715 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 BHLHB9Q6PI77 547 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CBLN3Q6UW01 205 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 LINC00114Q6XXX2 140 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 KLHL36Q8N4N3 616 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SETD6Q8TBK2 473 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 RGP1Q92546 391 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 GHSRQ92847 366 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 AHCYL2Q96HN2 611 aaKnown RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 DEPDC7Q96QD5 511 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SLC38A2Q96QD8 506 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ZNF426Q9BUY5 554 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ASB6Q9NWX5 421 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 MRPL15Q9P015 296 aaKnown RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CPNE7Q9UBL6 633 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 KLHDC2Q9Y2U9 406 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 COLEC10Q9Y6Z7 277 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CPAMD8Q8IZJ3 1885 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 A0A0A6YYJ9 748 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 OR6C68A6NDL8 312 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SLC9B1P1A6NJY1 282 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 LYRM1O43325 122 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 IDH3BO43837 385 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CD3GP09693 182 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SLC35G6P0C7Q6 338 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SAGP10523 405 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ATP6V1E1P36543 226 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 DEFA1P59665 94 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 DEFA3P59666 94 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 UBE2IP63279 158 aaKnown RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 FOXK1P85037 733 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 LTBQ06643 244 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 YIF1BQ5BJH7 314 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 TMPRSS11FQ6ZWK6 438 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CEACAM19Q7Z692 300 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 PXKQ7Z7A4 578 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 COX18Q8N8Q8 333 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 OR52N1Q8NH53 320 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 OR51Q1Q8NH59 317 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 FAM174AQ8TBP5 190 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SMPDL3BQ92485 455 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 RASD2Q96D21 266 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 DERL3Q96Q80 235 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 NMNAT3Q96T66 252 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ZFYVE21Q9BQ24 234 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SLC22A4Q9H015 551 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ISYNA1Q9NPH2 558 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CMC2Q9NRP2 79 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 MCUBQ9NWR8 336 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 LYARQ9NX58 379 aaKnown RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 EXTL2Q9UBQ6 330 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 MED12Q93074 2177 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 IGKV1D-42A0A075B6H8 117 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 OR6C70A6NIJ9 312 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 B3GALT2O43825 422 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 STX11O75558 287 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 GPR75O95800 540 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 APOA1P02647 267 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 MYF5P13349 255 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 PYCR1P32322 319 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 TNFRSF4P43489 277 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 TSFMP43897 325 aaKnown RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CCR6P51684 374 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CLDN12P56749 244 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 DGCR2P98153 550 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CRYZQ08257 329 aaKnown RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SUZ12Q15022 739 aaKnown RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CD226Q15762 336 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ZFP69Q49AA0 526 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 BIVMQ86UB2 503 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ZNF687Q8N1G0 1237 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CADM2Q8N3J6 435 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ACBD7Q8N6N7 88 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 SAMD12Q8N8I0 201 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 GDPD1Q8N9F7 314 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 DUSP18Q8NEJ0 188 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 BEST4Q8NFU0 473 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 OR11H7Q8NGC8 314 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 OR52E2Q8NGJ4 325 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 MOSPD2Q8NHP6 518 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 PCNPQ8WW12 178 aaKnown RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 MOAP1Q96BY2 351 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 PELI1Q96FA3 418 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 WDR92Q96MX6 357 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 FRMD6Q96NE9 622 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CD180Q99467 661 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 AUNIPQ9H7T9 357 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 BEX1Q9HBH7 125 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ACOXLQ9NUZ1 547 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ZMAT5Q9UDW3 170 aaKnown RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 CHRNA9Q9UGM1 479 aa5.55□□□□□ -1.52
CLCN3-201ENST00000347613 ING1Q9UK53 422 aaPredicted RBP5.55□□□□□ -1.52
CLCN3-201ENST00000347613 DSPP15924 2871 aaKnown RBP5.54□□□□□ -1.52
CLCN3-201ENST00000347613 TRAV6A0A075B6T7 132 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 TCRBV21S2A2A0A5A6 115 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 DAPL1A0PJW8 107 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 PLPP2O43688 288 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 MAP2K3P46734 347 aa5.54□□□□□ -1.52
CLCN3-201ENST00000347613 MAZP56270 477 aaKnown RBP5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms