RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 FCRLBQ6BAA4 426 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 LHFPL3Q86UP9 236 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 TMCO5AQ8N6Q1 288 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 SLC37A3Q8NCC5 494 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 OTULINQ96BN8 352 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 TRMT61AQ96FX7 289 aaKnown RBP15.2■□□□□ 0.02
CCDC40-201ENST00000269318 ARHGAP9Q9BRR9 750 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 TMEM43Q9BTV4 400 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 NXF2Q9GZY0 626 aaKnown RBP15.2■□□□□ 0.02
CCDC40-201ENST00000269318 CCDC59Q9P031 241 aaKnown RBP15.2■□□□□ 0.02
CCDC40-201ENST00000269318 CHRNA9Q9UGM1 479 aa15.2■□□□□ 0.02
CCDC40-201ENST00000269318 ZC3H12DA2A288 527 aaKnown RBP15.19■□□□□ 0.02
CCDC40-201ENST00000269318 HTR3EA5X5Y0 456 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 CCDC182A6NF36 153 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 ELOA3DA6NLF2 546 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-201ENST00000269318 CLDN25C9JDP6 229 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 PRR23D1E9PI22 279 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-201ENST00000269318 J3QRK9 145 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 OR7A10O76100 309 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 NDUFB2O95178 105 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 PRR23D2P0DMB1 279 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-201ENST00000269318 FGF5P12034 268 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 SLC2A5P22732 501 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 PSMA1P25786 263 aaKnown RBP15.19■□□□□ 0.02
CCDC40-201ENST00000269318 DUSP3P51452 185 aaPredicted RBP15.19■□□□□ 0.02
CCDC40-201ENST00000269318 RPS4XP62701 263 aaKnown RBP15.19■□□□□ 0.02
CCDC40-201ENST00000269318 RNF4P78317 190 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 TPBGQ13641 420 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 ELOA3BQ3SY89 546 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 LCN10Q6JVE6 187 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 ARHGAP11AQ6P4F7 1023 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 B3GLCTQ6Y288 498 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 MFSD4AQ8N468 514 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 PSD4Q8NDX1 1056 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 ELOA3Q8NG57 546 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 GATAD2BQ8WXI9 593 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 CDADC1Q9BWV3 514 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 PALMDQ9NP74 551 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 ERVK13-1Q9NX77 482 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 TNFRSF10DQ9UBN6 386 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 STUB1Q9UNE7 303 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 A3GALT2U3KPV4 340 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 ZDBF2Q9HCK1 2354 aa15.19■□□□□ 0.02
CCDC40-201ENST00000269318 ASCC3Q8N3C0 2202 aaKnown RBP15.19■□□□□ 0.02
CCDC40-201ENST00000269318 RIIAD1A6NNX1 92 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 SYPP08247 313 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 HK1P19367 917 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 NOS3P29474 1203 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 SLC6A8P48029 635 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 PSPHP78330 225 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 DBPQ10586 325 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-201ENST00000269318 TMED1Q13445 227 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 CRMP1Q14194 572 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF404Q494X3 552 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 ARMC4Q5T2S8 1044 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 MARCH3Q86UD3 253 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 BPHLQ86WA6 291 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-201ENST00000269318 BMPERQ8N8U9 685 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 OR51G2Q8NGK0 314 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 OR5M3Q8NGP4 307 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 MCFD2Q8NI22 146 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 LIPHQ8WWY8 451 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 TP53INP1Q96A56 240 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 NACC2Q96BF6 587 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 SECISBP2Q96T21 854 aaKnown RBP15.18■□□□□ 0.02
CCDC40-201ENST00000269318 SPSB2Q99619 263 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 WDR77Q9BQA1 342 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-201ENST00000269318 GTPBP2Q9BX10 602 aaKnown RBP15.18■□□□□ 0.02
CCDC40-201ENST00000269318 ADAM19Q9H013 955 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 SLC26A1Q9H2B4 701 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 MMP27Q9H306 513 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 C12orf10Q9HB07 376 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF337Q9Y3M9 751 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 SPIN1Q9Y657 262 aaPredicted RBP15.18■□□□□ 0.02
CCDC40-201ENST00000269318 C17orf51A8MQB3 221 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 MCIDASD6RGH6 385 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 ADAM10O14672 748 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 FADS1O60427 444 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 EIF4E2O60573 245 aaKnown RBP15.18■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF3P17036 446 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 EGR4Q05215 589 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 IL11RAQ14626 422 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 ZNF846Q147U1 533 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 PRR23CQ6ZRP0 262 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 ZBTB44Q8NCP5 570 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 OR9Q1Q8NGQ5 310 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 OR52N1Q8NH53 320 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 S100ZQ8WXG8 99 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 TEAD3Q99594 435 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 HMG20AQ9NP66 347 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 SF3B6Q9Y3B4 125 aaKnown RBP15.18■□□□□ 0.02
CCDC40-201ENST00000269318 FRYLO94915 3013 aa15.18■□□□□ 0.02
CCDC40-201ENST00000269318 OR6C70A6NIJ9 312 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 SLC22A31A6NKX4 558 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 HCRTR2O43614 444 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 NDUFB5O43674 189 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 GDF9O60383 454 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 LALBAP00709 142 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 BMP4P12644 408 aa15.17■□□□□ 0.02
CCDC40-201ENST00000269318 ATP6V1E1P36543 226 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms