RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Hoxb2P0C1T1 354 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Eif1P48024 113 aaKnown RBP12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Ccr1l1P51676 356 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Stard6P59096 233 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Tas2r7P59530 312 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Kpnb1P70168 876 aaKnown RBP12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 4930480E11RikQ0VG34 394 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Mier2Q3U3N0 541 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Ugt2b36Q3UEP4 530 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 B3gnt6Q3USF0 391 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Wdr20Q3UWE6 569 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Pcdhga7Q6DD96 935 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Cpeb4Q7TN98 729 aaKnown RBP12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Nabp1Q8BGW5 198 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 TiprlQ8BH58 271 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Cpne4Q8BLR2 557 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 IlvblQ8BU33 632 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Tprg1Q8CB49 279 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Hmgcs1Q8JZK9 520 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Vmn1r43Q8VIC9 329 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Rabep2Q91WG2 554 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Tpra1Q99MU1 369 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Nudt14Q9D142 222 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Rnf128Q9D304 428 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 MeiobQ9D513 470 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 SyncQ9EPM5 470 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Moap1Q9ERH6 352 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Stk19Q9JHN8 254 aa12.84□□□□□ -0.35
Ccdc88c-204ENSMUST00000223097 Trim55G3X8Y1 545 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Gm21820J3KMU2 361 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 P01808 119 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Hoxa6P09092 232 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 ChgbP16014 677 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Pou4f1P17208 421 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Art5P70352 309 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 SgcbP82349 320 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 C1qaP98086 245 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Znf575Q3TXZ1 239 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Kbtbd8Q3UQV5 599 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Rtp3Q5QGU6 474 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Wdr34Q5U4F6 535 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Traf4Q61382 470 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 ProcrQ64695 242 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Ube2j2Q6P073 259 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Olfr714Q7TRN0 317 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Cpne3Q8BT60 533 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 NdnfQ8C119 568 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Vps9d1Q8C190 649 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Vwc2Q8C8N3 324 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Fbxo4Q8CHQ0 385 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Slc39a8Q91W10 462 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Sucnr1Q99MT6 317 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Ctag2Q9D9S4 219 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 DhdhQ9DBB8 333 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Xylt2Q9EPL0 865 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Trim2Q9ESN6 744 aaKnown RBP12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Cryba2Q9JJV1 197 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Ldb3Q9JKS4 723 aaKnown RBP12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Hspb3Q9QZ57 154 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Decr2Q9WV68 292 aa12.83□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Calcoco2A2A6M5 331 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Gm20518E9Q548 580 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Slc27a2O35488 620 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Cdk5r2O35926 369 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 SagP20443 403 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Polr1bP70700 1135 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Kcnk2P97438 426 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Shc1P98083 579 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Brf2Q3UAW9 420 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Tex10Q3URQ0 928 aaKnown RBP12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Q8BG31 207 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 MaelQ8BVN9 434 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Guf1Q8C3X4 651 aaKnown RBP12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Zswim4Q8C7B8 1101 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Lrrn3Q8CBC6 707 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Ints14Q8R3P6 515 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Olfr827Q8VEV5 322 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Ms4a3Q920C4 213 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Smc6Q924W5 1097 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Dusp21Q9D9D8 189 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Arpc3Q9JM76 178 aaKnown RBP12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 CenphQ9QYM8 241 aa12.82□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Abca1P41233 2261 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Zfp534A2A7A1 661 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Olfr1338A2ACY7 313 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Glb1l3A2RSQ1 649 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Slc16a8O35308 492 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 TpmtO55060 240 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Nfatc1O88942 717 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 P01723 117 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Naa20P61600 178 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Serpina7P61939 418 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Atp5jP97450 108 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Pdp1Q3UV70 538 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Znf583Q3V080 568 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 XkrxQ5GH68 449 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Olfr1364Q5SZS9 314 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Runx1t1Q61909 577 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Olfr128Q7TRJ1 308 aa12.81□□□□□ -0.36
Ccdc88c-204ENSMUST00000223097 Mab21L3Q8CI17 429 aa12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 60.6 ms