RNA–Protein interactions for RNA: ENSMUST00000223097.1

Ccdc88c-204, Transcript of Protein Daple, mousemouse

TSL 1 (best) BASIC

Gene Ccdc88c, Length 1,253 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-204ENSMUST00000223097 Gm35339A0A140LHH9 1649 aa34.59■■■■□ 3.13
Ccdc88c-204ENSMUST00000223097 NischQ80TM9 1593 aa33.91■■■■□ 3.02
Ccdc88c-204ENSMUST00000223097 Abcc9P70170 1546 aa33.23■■■□□ 2.91
Ccdc88c-204ENSMUST00000223097 Abcc8B2RUS7 1588 aa33.01■■■□□ 2.88
Ccdc88c-204ENSMUST00000223097 ScribQ80U72 1612 aa32.26■■■□□ 2.76
Ccdc88c-204ENSMUST00000223097 NacadQ5SWP3 1504 aa31.18■■■□□ 2.58
Ccdc88c-204ENSMUST00000223097 Kdm5dQ62240 1548 aa31.03■■■□□ 2.56
Ccdc88c-204ENSMUST00000223097 Dnajc5bQ9CQ94 199 aa30.83■■■□□ 2.53
Ccdc88c-204ENSMUST00000223097 Sycp2Q9CUU3 1500 aa30.61■■■□□ 2.49
Ccdc88c-204ENSMUST00000223097 BicraF8VPZ9 1578 aa30.32■■■□□ 2.45
Ccdc88c-204ENSMUST00000223097 Dcaf1Q80TR8 1506 aa30.14■■■□□ 2.42
Ccdc88c-204ENSMUST00000223097 Pds5bQ4VA53 1446 aaKnown RBP29.65■■■□□ 2.34
Ccdc88c-204ENSMUST00000223097 Thoc2B1AZI6 1594 aaKnown RBP29.63■■■□□ 2.33
Ccdc88c-204ENSMUST00000223097 Rb1cc1Q9ESK9 1588 aa29.46■■■□□ 2.31
Ccdc88c-204ENSMUST00000223097 Atad2bE9Q166 1460 aaKnown RBP29.21■■■□□ 2.27
Ccdc88c-204ENSMUST00000223097 Cc2d2aQ8CFW7 1633 aa29.16■■■□□ 2.26
Ccdc88c-204ENSMUST00000223097 Crybg2B7ZCC2 1516 aa29.02■■■□□ 2.24
Ccdc88c-204ENSMUST00000223097 Baz1aO88379 1555 aa28.98■■■□□ 2.23
Ccdc88c-204ENSMUST00000223097 Ercc6F8VPZ5 1481 aa28.96■■■□□ 2.23
Ccdc88c-204ENSMUST00000223097 Fam135aQ6NS59 1506 aa28.79■■■□□ 2.2
Ccdc88c-204ENSMUST00000223097 Zcchc6Q5BLK4 1491 aaKnown RBP28.78■■■□□ 2.2
Ccdc88c-204ENSMUST00000223097 Smarca2Q6DIC0 1577 aa28.77■■■□□ 2.2
Ccdc88c-204ENSMUST00000223097 Ccdc180J3QNE4 1664 aa28.75■■■□□ 2.19
Ccdc88c-204ENSMUST00000223097 Rhox8Q6VSS7 320 aa28.69■■■□□ 2.18
Ccdc88c-204ENSMUST00000223097 Dnajc5P60904 198 aa28.64■■■□□ 2.18
Ccdc88c-204ENSMUST00000223097 Smarca4Q3TKT4 1613 aaKnown RBP28.61■■■□□ 2.17
Ccdc88c-204ENSMUST00000223097 Iqgap2Q3UQ44 1575 aa28.58■■■□□ 2.17
Ccdc88c-204ENSMUST00000223097 Phldb1Q6PDH0 1371 aaKnown RBP28.52■■■□□ 2.16
Ccdc88c-204ENSMUST00000223097 Frmpd1A2AKB4 1549 aa28.48■■■□□ 2.15
Ccdc88c-204ENSMUST00000223097 Wdr62Q3U3T8 1523 aa28.46■■■□□ 2.15
Ccdc88c-204ENSMUST00000223097 Ubl4bQ9CQ84 188 aa28.41■■■□□ 2.14
Ccdc88c-204ENSMUST00000223097 Cecr2E9Q2Z1 1453 aa28.4■■■□□ 2.14
Ccdc88c-204ENSMUST00000223097 Baz1bQ9Z277 1479 aa28.4■■■□□ 2.14
Ccdc88c-204ENSMUST00000223097 Trim41Q5NCC3 630 aa28.27■■■□□ 2.12
Ccdc88c-204ENSMUST00000223097 Mrc2Q64449 1479 aa28.17■■■□□ 2.1
Ccdc88c-204ENSMUST00000223097 Unc13aQ4KUS2 1712 aa27.95■■■□□ 2.07
Ccdc88c-204ENSMUST00000223097 Lrriq1Q0P5X1 1673 aa27.58■■■□□ 2.01
Ccdc88c-204ENSMUST00000223097 CftrP26361 1476 aa27.57■■■□□ 2
Ccdc88c-204ENSMUST00000223097 Rsf1E9PWW9 1441 aaKnown RBP27.51■■□□□ 1.99
Ccdc88c-204ENSMUST00000223097 Cttnbp2B9EJA2 1648 aa27.46■■□□□ 1.99
Ccdc88c-204ENSMUST00000223097 Synj1Q8CHC4 1574 aa27.4■■□□□ 1.98
Ccdc88c-204ENSMUST00000223097 Cux2P70298 1426 aa27.39■■□□□ 1.97
Ccdc88c-204ENSMUST00000223097 Shroom2A2ALU4 1481 aa27.32■■□□□ 1.96
Ccdc88c-204ENSMUST00000223097 Kif21aQ9QXL2 1672 aa27.27■■□□□ 1.96
Ccdc88c-204ENSMUST00000223097 Brd4Q9ESU6 1400 aaKnown RBP27.25■■□□□ 1.95
Ccdc88c-204ENSMUST00000223097 Kif15Q6P9L6 1387 aa27.23■■□□□ 1.95
Ccdc88c-204ENSMUST00000223097 Eif4g3Q80XI3 1579 aaKnown RBP27.15■■□□□ 1.94
Ccdc88c-204ENSMUST00000223097 Col17a1Q07563 1470 aa27.15■■□□□ 1.94
Ccdc88c-204ENSMUST00000223097 Esf1Q3V1V3 845 aaKnown RBP27.15■■□□□ 1.94
Ccdc88c-204ENSMUST00000223097 Npm1Q61937 292 aaKnown RBP27.12■■□□□ 1.93
Ccdc88c-204ENSMUST00000223097 Ccdc136Q3TVA9 1136 aa27.04■■□□□ 1.92
Ccdc88c-204ENSMUST00000223097 Pabpn1Q8CCS6 302 aaKnown RBP27.03■■□□□ 1.92
Ccdc88c-204ENSMUST00000223097 Lamc3Q9R0B6 1581 aa26.9■■□□□ 1.9
Ccdc88c-204ENSMUST00000223097 Urb2E9Q7L1 1524 aaKnown RBP26.88■■□□□ 1.89
Ccdc88c-204ENSMUST00000223097 Cep164Q5DU05 1446 aa26.88■■□□□ 1.89
Ccdc88c-204ENSMUST00000223097 Top2bQ64511 1612 aa26.86■■□□□ 1.89
Ccdc88c-204ENSMUST00000223097 Plb1Q3TTY0 1478 aa26.81■■□□□ 1.88
Ccdc88c-204ENSMUST00000223097 Rtl1Q7M732 1744 aa26.81■■□□□ 1.88
Ccdc88c-204ENSMUST00000223097 Pelp1Q9DBD5 1123 aaKnown RBP26.78■■□□□ 1.88
Ccdc88c-204ENSMUST00000223097 Dhx29Q6PGC1 1365 aaKnown RBP26.75■■□□□ 1.87
Ccdc88c-204ENSMUST00000223097 Il27Q8K3I6 234 aa26.68■■□□□ 1.86
Ccdc88c-204ENSMUST00000223097 Zcchc11B2RX14 1644 aaKnown RBP26.58■■□□□ 1.85
Ccdc88c-204ENSMUST00000223097 LrpprcQ6PB66 1392 aaKnown RBP26.58■■□□□ 1.84
Ccdc88c-204ENSMUST00000223097 Ccdc18Q640L5 1455 aa26.54■■□□□ 1.84
Ccdc88c-204ENSMUST00000223097 Pcdh10E9PXQ7 1057 aa26.53■■□□□ 1.84
Ccdc88c-204ENSMUST00000223097 Crocc2F6XLV1 1638 aa26.53■■□□□ 1.84
Ccdc88c-204ENSMUST00000223097 Rusc2Q80U22 1514 aa26.51■■□□□ 1.83
Ccdc88c-204ENSMUST00000223097 Ift140E9PY46 1464 aa26.48■■□□□ 1.83
Ccdc88c-204ENSMUST00000223097 PogzQ8BZH4 1409 aaKnown RBP26.32■■□□□ 1.8
Ccdc88c-204ENSMUST00000223097 Camsap1A2AHC3 1581 aa26.32■■□□□ 1.8
Ccdc88c-204ENSMUST00000223097 TnnQ80Z71 1560 aa26.32■■□□□ 1.8
Ccdc88c-204ENSMUST00000223097 Arhgef5E9Q7D5 1581 aa26.27■■□□□ 1.8
Ccdc88c-204ENSMUST00000223097 Ttbk1Q6PCN3 1308 aa26.26■■□□□ 1.79
Ccdc88c-204ENSMUST00000223097 Adgrl3Q80TS3 1537 aa26.24■■□□□ 1.79
Ccdc88c-204ENSMUST00000223097 Disp1Q3TDN0 1521 aa26.23■■□□□ 1.79
Ccdc88c-204ENSMUST00000223097 Duox2A2AQ99 1517 aa26.19■■□□□ 1.78
Ccdc88c-204ENSMUST00000223097 Gm156Q58A37 223 aa26.16■■□□□ 1.78
Ccdc88c-204ENSMUST00000223097 PtprkP35822 1457 aa26.15■■□□□ 1.78
Ccdc88c-204ENSMUST00000223097 Golga3P55937 1487 aa26.11■■□□□ 1.77
Ccdc88c-204ENSMUST00000223097 Cc2d2bA0A286YDU8 1405 aa26.11■■□□□ 1.77
Ccdc88c-204ENSMUST00000223097 Nup160Q9Z0W3 1402 aaKnown RBP26.08■■□□□ 1.77
Ccdc88c-204ENSMUST00000223097 PtprtQ99M80 1454 aa26.06■■□□□ 1.76
Ccdc88c-204ENSMUST00000223097 Cep170Q6A065 1588 aa26.04■■□□□ 1.76
Ccdc88c-204ENSMUST00000223097 Cngb1E1AZ71 1325 aa26.04■■□□□ 1.76
Ccdc88c-204ENSMUST00000223097 Gapvd1Q6PAR5 1458 aa26.03■■□□□ 1.76
Ccdc88c-204ENSMUST00000223097 Setd1bQ8CFT2 1985 aa26.02■■□□□ 1.76
Ccdc88c-204ENSMUST00000223097 Fgd6Q69ZL1 1399 aa25.99■■□□□ 1.75
Ccdc88c-204ENSMUST00000223097 Pbrm1Q8BSQ9 1634 aaKnown RBP25.95■■□□□ 1.74
Ccdc88c-204ENSMUST00000223097 Grin2bQ01097 1482 aa25.92■■□□□ 1.74
Ccdc88c-204ENSMUST00000223097 Samd9lQ69Z37 1561 aa25.91■■□□□ 1.74
Ccdc88c-204ENSMUST00000223097 Fmn1Q05860 1466 aa25.87■■□□□ 1.73
Ccdc88c-204ENSMUST00000223097 AqrQ8CFQ3 1481 aaKnown RBP25.85■■□□□ 1.73
Ccdc88c-204ENSMUST00000223097 Rad54l2Q99NG0 1466 aa25.85■■□□□ 1.73
Ccdc88c-204ENSMUST00000223097 Efcab5A0JP43 1406 aa25.84■■□□□ 1.73
Ccdc88c-204ENSMUST00000223097 AknaQ80VW7 1404 aa25.8■■□□□ 1.72
Ccdc88c-204ENSMUST00000223097 Grin2aP35436 1464 aa25.79■■□□□ 1.72
Ccdc88c-204ENSMUST00000223097 Ythdc2B2RR83 1445 aaKnown RBP25.79■■□□□ 1.72
Ccdc88c-204ENSMUST00000223097 Abcc1O35379 1528 aa25.76■■□□□ 1.71
Ccdc88c-204ENSMUST00000223097 Pprc1Q6NZN1 1644 aa25.76■■□□□ 1.71
Ccdc88c-204ENSMUST00000223097 Magi3Q9EQJ9 1476 aa25.74■■□□□ 1.71
Retrieved 100 of 22,080 RNA–protein pairs in 25.2 ms