RNA–Protein interactions for RNA: ENST00000634178.1

TRAPPC9-216, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2

Gene TRAPPC9, Length 455 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-216ENST00000634178 RIPK1Q13546 671 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 SF3A2Q15428 464 aaKnown RBP4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 CD226Q15762 336 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 LPAL2Q16609 132 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 RUSC1-AS1Q66K80 236 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 CEACAM19Q7Z692 300 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 CATSPER3Q86XQ3 398 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 GRAMD2AQ8IUY3 354 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 TRMT10AQ8TBZ6 339 aaKnown RBP4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 SPRYD4Q8WW59 207 aaPredicted RBP4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 SHC3Q92529 594 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 MYLPFQ96A32 169 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 TADA1Q96BN2 335 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 UPRTQ96BW1 309 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 MBOAT7Q96N66 472 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 HSD17B14Q9BPX1 270 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 SLC30A2Q9BRI3 323 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 TMEM175Q9BSA9 504 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 TRIM51Q9BSJ1 452 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 ZSCAN5AQ9BUG6 496 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 RPP25Q9BUL9 199 aaKnown RBP4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 GORASP2Q9H8Y8 452 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 TAS2R16Q9NYV7 291 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 GALPQ9UBC7 116 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 RNF14Q9UBS8 474 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 HPCAL4Q9UM19 191 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 MYO18BQ8IUG5 2567 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 NOTCH4Q99466 2003 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 SDK1Q7Z5N4 2213 aa4.15□□□□□ -1.75
TRAPPC9-216ENST00000634178 SHROOM3Q8TF72 1996 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 USP9XQ93008 2570 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 ASCC3Q8N3C0 2202 aaKnown RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 NUP205Q92621 2012 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 A0A087X002 238 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 IGKV6D-21A0A0A0MT36 114 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 IMPA2O14732 288 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 BCAS1O75363 584 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 MBD3O95983 291 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 OAS1P00973 400 aaKnown RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 CA8P35219 290 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 RDXP35241 583 aaKnown RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 CAPGP40121 348 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 LRRC74AQ0VAA2 488 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 CALCOCO2Q13137 446 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 MESDQ14696 234 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 NECTIN1Q15223 517 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 WDR25Q64LD2 544 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 SEL1L3Q68CR1 1132 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 SCYL2Q6P3W7 929 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 ARL14Q8N4G2 192 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 NPRL2Q8WTW4 380 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 GTF3AQ92664 365 aaKnown RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 FGF13Q92913 245 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 ART4Q93070 314 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 NABP1Q96AH0 204 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 ELSPBP1Q96BH3 223 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 OPRPNQ99935 248 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 ATF6BQ99941 703 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 EDEM2Q9BV94 578 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 TBC1D10AQ9BXI6 508 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 RNF41Q9H4P4 317 aaPredicted RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 AZI2Q9H6S1 392 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 ABCC13Q9NSE7 274 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 RABL2BQ9UNT1 228 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 SMC3Q9UQE7 1217 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 RRP15Q9Y3B9 282 aaKnown RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 CPQQ9Y646 472 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 SPACA6W5XKT8 324 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 TICRRQ7Z2Z1 1910 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 MYH9P35579 1960 aaKnown RBP4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 EML5Q05BV3 1969 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 NFASCO94856 1347 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 CFAP46Q8IYW2 2715 aa4.14□□□□□ -1.75
TRAPPC9-216ENST00000634178 APC2O95996 2303 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 COL6A6A6NMZ7 2263 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 URB1O60287 2271 aaKnown RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 IGLV4-3A0A075B6K6 122 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 TRBV7-9A0A0J9YWB2 115 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 MFSD2BA6NFX1 497 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 C11orf98E9PRG8 122 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 IDH3BO43837 385 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 TYROBPO43914 113 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 SORBS2O94875 1100 aaKnown RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 CCDC159P0C7I6 412 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 GOLGA8HP0CJ92 632 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 SLC11A1P49279 550 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 STK19P49842 368 aaPredicted RBP4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 PPT1P50897 306 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 TFDP1Q14186 410 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 PDK3Q15120 406 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 LINC01620Q4KN68 170 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 DCST2Q5T1A1 773 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 REP15Q6BDI9 236 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 BTNL3Q6UXE8 466 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 ERICH1Q86X53 443 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 OR4F17Q8NGA8 305 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 C11orf45Q8TAV5 145 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 LRRC15Q8TF66 581 aa4.13□□□□□ -1.75
TRAPPC9-216ENST00000634178 DNASE2BQ8WZ79 361 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms