RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ROPN1Q9HAT0 212 aaPredicted RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 ACER3Q9NUN7 267 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 EXD2Q9NVH0 621 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 ASIC5Q9NY37 505 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 CISD1Q9NZ45 108 aaKnown RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 PCDHGB4Q9UN71 923 aa11.63□□□□□ -0.55
RPS28-204ENST00000602140 FBN1P35555 2871 aaKnown RBP11.63□□□□□ -0.55
RPS28-204ENST00000602140 WDR91A4D1P6 747 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 SHISA9B4DS77 424 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 ABCD4O14678 606 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 ITM2AO43736 263 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 TYROBPO43914 113 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 KIAA0513O60268 411 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 ADAM11O75078 769 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 BCAS1O75363 584 aaPredicted RBP11.62□□□□□ -0.55
RPS28-204ENST00000602140 PGM3O95394 542 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 CD8AP01732 235 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 IGHV3-9P01782 118 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 THBS1P07996 1170 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 OR12D1P0DN82 309 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 TFPIP10646 304 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 COX5AP20674 150 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 RYKP34925 604 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 PGM1P36871 562 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 ETV4P43268 484 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 CDH11P55287 796 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 VSNL1P62760 191 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 SMU1Q2TAY7 513 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 ATAD3BQ5T9A4 648 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 TYW3Q6IPR3 259 aaKnown RBP11.62□□□□□ -0.55
RPS28-204ENST00000602140 MTDHQ86UE4 582 aaKnown RBP11.62□□□□□ -0.55
RPS28-204ENST00000602140 ANKRD46Q86W74 232 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 ZNF433Q8N7K0 673 aaPredicted RBP11.62□□□□□ -0.55
RPS28-204ENST00000602140 FAM71CQ8NEG0 241 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 OR8J2Q8NGG1 315 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 ZNF563Q8TA94 476 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 MIPOL1Q8TD10 442 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 SLC25A43Q8WUT9 341 aaPredicted RBP11.62□□□□□ -0.55
RPS28-204ENST00000602140 RAB8BQ92930 207 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 DNAJA3Q96EY1 480 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 PKNOX2Q96KN3 472 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 HS6ST2Q96MM7 605 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 DPY30Q9C005 99 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 AKTIPQ9H8T0 292 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 CTPS2Q9NRF8 586 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 NPAP1Q9NZP6 1156 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 EMC3Q9P0I2 261 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 GDF2Q9UK05 429 aaPredicted RBP11.62□□□□□ -0.55
RPS28-204ENST00000602140 WDR45Q9Y484 360 aa11.62□□□□□ -0.55
RPS28-204ENST00000602140 ANK3Q12955 4377 aaKnown RBP11.61□□□□□ -0.55
RPS28-204ENST00000602140 IGKV3D-15A0A087WSY6 115 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 OR5H1A6NKK0 313 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 RAD51DO75771 328 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 CPSF4O95639 269 aaKnown RBP11.61□□□□□ -0.55
RPS28-204ENST00000602140 AGR2O95994 175 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 TP53P04637 393 aaPredicted RBP11.61□□□□□ -0.55
RPS28-204ENST00000602140 PTNP21246 168 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 APOBEC1P41238 236 aaKnown RBP11.61□□□□□ -0.55
RPS28-204ENST00000602140 PHC1P78364 1004 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 FUT5Q11128 374 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 PDK3Q15120 406 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 FBXW9Q5XUX1 488 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 ABLIM2Q6H8Q1 611 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 TNFAIP8L2Q6P589 184 aaPredicted RBP11.61□□□□□ -0.55
RPS28-204ENST00000602140 CXXC5Q7LFL8 322 aaKnown RBP11.61□□□□□ -0.55
RPS28-204ENST00000602140 SSX8Q7RTT4 187 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 HMGN2P46Q86SG4 172 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 DTX2Q86UW9 622 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 P2RY8Q86VZ1 359 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 UBE2J2Q8N2K1 259 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 ZNF781Q8N8C0 355 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 ROPN1LQ96C74 230 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 ZG16BQ96DA0 208 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 ZHX1-C8orf76Q96EF9 292 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 ARL5BQ96KC2 179 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 ZIM3Q96PE6 472 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 CCDC106Q9BWC9 280 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 FAIMQ9NVQ4 179 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 CHRNA9Q9UGM1 479 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 SLC35A3Q9Y2D2 325 aa11.61□□□□□ -0.55
RPS28-204ENST00000602140 NOSIPQ9Y314 301 aaKnown RBP11.61□□□□□ -0.55
RPS28-204ENST00000602140 SPIN1Q9Y657 262 aaPredicted RBP11.61□□□□□ -0.55
RPS28-204ENST00000602140 PRSS51A0A1B0GVH4 220 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 CIB4A0PJX0 185 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 CCT8L1PA6NM43 557 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 ZNF716A6NP11 495 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 ANKRD28O15084 1053 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 SCN2BO60939 215 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 PMS2P2O95744 297 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 GUSBP08236 651 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 UQCRC2P22695 453 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 CHI3L2Q15782 390 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 ANXA8L1Q5VT79 327 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 AGAP6Q5VW22 663 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 SAXO2Q658L1 398 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 FRRS1Q6ZNA5 592 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 DNM1P46Q6ZS02 220 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 OR52N5Q8NH56 324 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 OIT3Q8WWZ8 545 aa11.6□□□□□ -0.55
RPS28-204ENST00000602140 APH1AQ96BI3 265 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms